RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 C11orf1Q9H5F2 150 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 PRRG2O14669 202 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 GPR137BO60478 399 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 P2RY1P47900 373 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 KLF3P57682 345 aaPredicted RBP17.83■□□□□ 0.45
LIME1-210ENST00000621325 SLC35E4Q6ICL7 350 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 OR52L2PQ8NGH6 319 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 OR2V2Q96R30 315 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 KCNIP1Q9NZI2 227 aa17.83■□□□□ 0.45
LIME1-210ENST00000621325 ZNF705EA8MWA4 302 aaPredicted RBP17.83■□□□□ 0.44
LIME1-210ENST00000621325 SPRY3O43610 288 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 FOLR2P14207 255 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 NQO2P16083 231 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 S100GP29377 79 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 CD200P41217 278 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 SRSF3P84103 164 aaKnown RBP17.83■□□□□ 0.44
LIME1-210ENST00000621325 GNMTQ14749 295 aa17.83■□□□□ 0.44
LIME1-210ENST00000621325 CXorf65A6NEN9 183 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 K7ENP7 123 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 PEA15Q15121 130 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 MST1LQ2TV78 715 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 GFRALQ6UXV0 394 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 SPIN2AQ99865 258 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 SPIN2BQ9BPZ2 258 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 DCTN5Q9BTE1 182 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 PIGMQ9H3S5 423 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 RNF150Q9ULK6 438 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 TLN1Q9Y490 2541 aaKnown RBP17.82■□□□□ 0.44
LIME1-210ENST00000621325 FAM24AA6NFZ4 105 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 TCAPO15273 167 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 SSSCA1O60232 199 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 JTBO76095 146 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 IGKV1-39P01597 117 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 HBZP02008 142 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 GAPDHP04406 335 aaKnown RBP17.82■□□□□ 0.44
LIME1-210ENST00000621325 IGKV1D-39P04432 117 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 SERPINE2P07093 398 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 EPHA1P21709 976 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 KRBOX4Q5JUW0 171 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 DRAM1Q8N682 238 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 LPAR3Q9UBY5 353 aa17.82■□□□□ 0.44
LIME1-210ENST00000621325 IGHV3OR15-7A0A075B7D8 119 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 CLEC18AA5D8T8 446 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 ZNF16P17020 682 aaPredicted RBP17.81■□□□□ 0.44
LIME1-210ENST00000621325 SSTR5P35346 364 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 GPR157Q5UAW9 335 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 MOGAT3Q86VF5 341 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 ZNF383Q8NA42 475 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 CLEC18CQ8NCF0 446 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 OR13A1Q8NGR1 328 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 GALMQ96C23 342 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 SNRNP40Q96DI7 357 aaKnown RBP17.81■□□□□ 0.44
LIME1-210ENST00000621325 MRPL37Q9BZE1 423 aaKnown RBP17.81■□□□□ 0.44
LIME1-210ENST00000621325 IGKV1D-17A0A075B6S4 117 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 DUXBA0A1W2PPF3 345 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 TMEM50AO95807 157 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 IL2RGP31785 369 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 PRDX2P32119 198 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 EIF5AP63241 154 aaKnown RBP17.81■□□□□ 0.44
LIME1-210ENST00000621325 C3orf36Q3SXR2 165 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 UQCC3Q6UW78 93 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 GCSAMQ8N6F7 178 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 IL22RA2Q969J5 263 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 GPR146Q96CH1 333 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 CBY1Q9Y3M2 126 aa17.81■□□□□ 0.44
LIME1-210ENST00000621325 OOEPA6NGQ2 149 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 SRRM5B3KS81 715 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 IFNL4K9M1U5 179 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 FAM87AP0C7U9 286 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 MZT1Q08AG7 82 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 IGLV3-9A0A075B6K5 115 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 IGSF23A1L1A6 192 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 PPIHO43447 177 aaKnown RBP17.8■□□□□ 0.44
LIME1-210ENST00000621325 CD40P25942 277 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 CAV2P51636 162 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 EWSR1Q01844 656 aaKnown RBP eCLIP17.8■□□□□ 0.44
LIME1-210ENST00000621325 ID3Q02535 119 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 EDDM3AQ14507 147 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 Q6ZRM9 215 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 TGIF2LXQ8IUE1 241 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 OR2C3Q8N628 320 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 UBAC2Q8NBM4 344 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 RFESDQ8TAC1 157 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 TCTEX1D2Q8WW35 142 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 AKR1E2Q96JD6 320 aa17.8■□□□□ 0.44
LIME1-210ENST00000621325 IGF2RP11717 2491 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 LPAR6P43657 344 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 RAB2AP61019 212 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 ZNF585BQ52M93 769 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 ITLN1Q8WWA0 313 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 C5orf30Q96GV9 206 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 CARHSP1Q9Y2V2 147 aaKnown RBP17.79■□□□□ 0.44
LIME1-210ENST00000621325 ZNF737O75373 536 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 PPP1CCP36873 323 aaKnown RBP17.79■□□□□ 0.44
LIME1-210ENST00000621325 PYY3Q5JQD4 70 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 FAM201AQ5SY85 155 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 C10orf91Q5T1B1 145 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 MISP3Q96FF7 219 aa17.79■□□□□ 0.44
LIME1-210ENST00000621325 ROS1P08922 2347 aa17.78■□□□□ 0.44
LIME1-210ENST00000621325 DIDO1Q9BTC0 2240 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 482.6 ms