RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SSTR5P35346 364 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
VTA1-205ENST00000620996 PRSS54Q6PEW0 395 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 PCSK4Q6UW60 755 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 SVBPQ8N300 66 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 CD177Q8N6Q3 437 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 ZNRF1Q8ND25 227 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 GALMQ96C23 342 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 RRNAD1Q96FB5 475 aaKnown RBP8.34□□□□□ -1.07
VTA1-205ENST00000620996 HES4Q9HCC6 221 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 TREM1Q9NP99 234 aa8.34□□□□□ -1.07
VTA1-205ENST00000620996 A0A087X0M5 115 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 A0A1B0GX30 115 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 MSGN1A6NI15 193 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 C12orf77C9JDV5 145 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 YIF1AO95070 293 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 IGHV1-46P01743 117 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 THBDP07204 575 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 CD200P41217 278 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 H1FOOQ8IZA3 346 aaPredicted RBP8.34□□□□□ -1.08
VTA1-205ENST00000620996 FAM185AQ8N0U4 392 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 OR52M1Q8NGK5 317 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 LINC01560Q8TB33 94 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 VKORC1Q9BQB6 163 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 RNF126Q9BV68 326 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 PPP1R14DQ9NXH3 145 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 DMRT1Q9Y5R6 373 aa8.34□□□□□ -1.08
VTA1-205ENST00000620996 HBZP02008 142 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 S100A7P31151 101 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
VTA1-205ENST00000620996 UBA52P62987 128 aaKnown RBP8.33□□□□□ -1.08
VTA1-205ENST00000620996 GNMTQ14749 295 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 SRSF7Q16629 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
VTA1-205ENST00000620996 GCSAMQ8N6F7 178 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 TCTEX1D2Q8WW35 142 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 COQ2Q96H96 371 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 PIEZO1Q92508 2521 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 K7EPK0 472 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 PGLYRP1O75594 196 aaPredicted RBP8.33□□□□□ -1.08
VTA1-205ENST00000620996 FAM71E2Q8N5Q1 922 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 OR13A1Q8NGR1 328 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 NEUROG1Q92886 237 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 MSI2Q96DH6 328 aaKnown RBP8.33□□□□□ -1.08
VTA1-205ENST00000620996 TMEM222Q9H0R3 208 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 MAGT1Q9H0U3 335 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 TLNRD1Q9H1K6 362 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 DYNLRB1Q9NP97 96 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 PKDREJQ9NTG1 2253 aa8.33□□□□□ -1.08
VTA1-205ENST00000620996 TRBV6-6A0A0A6YYG2 114 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 OOEPA6NGQ2 149 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 ADAM20O43506 726 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 ZNF880Q6PDB4 577 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 TGIF2LYQ8IUE0 185 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 CNTNAP3BQ96NU0 1288 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 CNTNAP3Q9BZ76 1288 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 OR2D2Q9H210 308 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 NGBQ9NPG2 151 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 CACNA1DQ01668 2161 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
VTA1-205ENST00000620996 OMGP23515 440 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 SRPXP78539 464 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 TLE1Q04724 770 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 PEA15Q15121 130 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 PPP1R35Q8TAP8 253 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 ISOC2Q96AB3 205 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 CABLES2Q9BTV7 478 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 CHD3Q12873 2000 aaKnown RBP8.32□□□□□ -1.08
VTA1-205ENST00000620996 IGLV3-9A0A075B6K5 115 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 IGKV1D-17A0A075B6S4 117 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 VSTM5A8MXK1 200 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 MBPP02686 304 aaPredicted RBP8.32□□□□□ -1.08
VTA1-205ENST00000620996 ZNF345Q14585 488 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 C3orf36Q3SXR2 165 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 SLC35E4Q6ICL7 350 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 C18orf12Q96KH6 178 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 NEU1Q99519 415 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
VTA1-205ENST00000620996 SPINT2O43291 252 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 GYPAP02724 150 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 RPL12P30050 165 aaKnown RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 TESK1Q15569 626 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 ADIPOQQ15848 244 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 IZUMO4Q1ZYL8 232 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 C16orf54Q6UWD8 224 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 BSCL2Q96G97 398 aaPredicted RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 GCM1Q9NP62 436 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 A0A1B0GW55 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 SSSCA1O60232 199 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L2P0CJ85 424 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms