RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NECAP2Q9NVZ3 263 aa11□□□□□ -0.65
NEK3-210ENST00000620675 FAM96BQ9Y3D0 163 aa11□□□□□ -0.65
NEK3-210ENST00000620675 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
NEK3-210ENST00000620675 TNCP24821 2201 aa11□□□□□ -0.65
NEK3-210ENST00000620675 TENM1Q9UKZ4 2725 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 ZNF736B4DX44 427 aaPredicted RBP10.99□□□□□ -0.65
NEK3-210ENST00000620675 RGS11O94810 467 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 IGHV4-59P01825 116 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 DYRK1AQ13627 763 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 PIFOQ8TCI5 191 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 OR2D2Q9H210 308 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 IGHV3-72A0A0B4J1Y9 119 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 DIRAS3O95661 229 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 IGLV2-14P01704 120 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 FXYD4P59646 89 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 BPIFB3P59826 476 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 ACTBP60709 375 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 ACTG1P63261 375 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 Q3ZCU0 254 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
NEK3-210ENST00000620675 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 OR2W1Q9Y3N9 320 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
NEK3-210ENST00000620675 ANKRD20A5PA0PJZ0 165 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 LEUTXA8MZ59 168 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 HSD17B6O14756 317 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 CD74P04233 296 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 FBP1P09467 338 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 CTXN2P0C2S0 81 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 TAS2R46P59540 309 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 TMEM229BQ8NBD8 167 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 OR4C16Q8NGL9 310 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 RTN4IP1Q8WWV3 396 aaPredicted RBP10.98□□□□□ -0.65
NEK3-210ENST00000620675 TAF15Q92804 592 aaKnown RBP eCLIP10.98□□□□□ -0.65
NEK3-210ENST00000620675 RPEQ96AT9 228 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 MALSU1Q96EH3 234 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
NEK3-210ENST00000620675 RABL2AQ9UBK7 228 aaPredicted RBP10.98□□□□□ -0.65
NEK3-210ENST00000620675 RABL2BQ9UNT1 228 aa10.98□□□□□ -0.65
NEK3-210ENST00000620675 HOXA3O43365 443 aaPredicted RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 PPYP01298 95 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 PTBP1P26599 531 aaKnown RBP eCLIP10.97□□□□□ -0.658e-14■■■□□ 15
NEK3-210ENST00000620675 ZNF137PP52743 207 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 ZNF45Q02386 682 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 STEAP1BQ6NZ63 245 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 Q6YL49 198 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 GLDNQ6ZMI3 551 aaPredicted RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 TMEM17Q86X19 198 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 PRIMA1Q86XR5 153 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 EDARADDQ8WWZ3 215 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 TOMM40LQ969M1 308 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 MRPL20Q9BYC9 149 aaKnown RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 MEGF9Q9H1U4 602 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 PRDM13Q9H4Q3 707 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 LINC00854A0A1B0GVQ3 168 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 OR5H14A6NHG9 310 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 H3BUX3 64 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 ITGB1BP1O14713 200 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 TIMM23O14925 209 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 VENTXO95231 258 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 RAB3DO95716 219 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 TAS2R19P59542 299 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 DHRS11Q6UWP2 260 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 ZDHHC22Q8N966 263 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 SECTM1Q8WVN6 248 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 GIMAP1Q8WWP7 306 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 CFHR4Q92496 578 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 SSX3Q99909 188 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 FXYD6Q9H0Q3 95 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 SDHAF2Q9NX18 166 aa10.97□□□□□ -0.65
NEK3-210ENST00000620675 AMMECR1Q9Y4X0 333 aaPredicted RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 RBM7Q9Y580 266 aaKnown RBP10.97□□□□□ -0.65
NEK3-210ENST00000620675 IGHV1-3A0A0C4DH29 117 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 IL7P13232 177 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 IER3P46695 156 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 GPR12P47775 334 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
NEK3-210ENST00000620675 LY6EQ16553 131 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 RNASE10Q5GAN6 216 aaKnown RBP10.96□□□□□ -0.65
NEK3-210ENST00000620675 VAX1Q5SQQ9 334 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 AADACL3Q5VUY0 350 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.65
NEK3-210ENST00000620675 GDPD1Q8N9F7 314 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 CCL28Q9NRJ3 127 aa10.96□□□□□ -0.65
NEK3-210ENST00000620675 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.66
NEK3-210ENST00000620675 RAB29O14966 203 aa10.96□□□□□ -0.66
NEK3-210ENST00000620675 AMY2AP04746 511 aa10.96□□□□□ -0.66
NEK3-210ENST00000620675 CSF1P09603 554 aa10.96□□□□□ -0.66
NEK3-210ENST00000620675 CT45A6P0DMU7 189 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms