RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 STX19Q8N4C7 294 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 TMEM163Q8TC26 289 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 DYDC1Q8WWB3 177 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 PTX4Q96A99 478 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 GALNT14Q96FL9 552 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 OR5B12Q96R08 314 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 APOL4Q9BPW4 351 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 MRPL20Q9BYC9 149 aaKnown RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 ARL8BQ9NVJ2 186 aa3.39□□□□□ -1.87
SNCA-213ENST00000618500 PAK1IP1Q9NWT1 392 aaPredicted RBP3.39□□□□□ -1.87
SNCA-213ENST00000618500 A0A0B4J203 849 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 F8W735 103 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 H0YJW9 148 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 J3QRE1 110 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 BMPR1BO00238 502 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 REG1BP48304 166 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF134P52741 427 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SYNJ2BPP57105 145 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 GPR176Q14439 515 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 PSG5Q15238 335 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 TMEM177Q53S58 311 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF880Q6PDB4 577 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 IQCF1Q8N6M8 205 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ARL11Q969Q4 196 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SPAG8Q99932 426 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 AIPO00170 330 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 GABRPO00591 440 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 DIRAS3O95661 229 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FGF2P09038 288 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 CD7P09564 240 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 P0DMU3 169 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FAM231AP0DMU4 169 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FAM231CP0DMU5 169 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 CXCR4P61073 352 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SSBP2P81877 361 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 RBMS2Q15434 407 aaKnown RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 KISS1Q15726 138 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SLC25A30Q5SVS4 291 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF57Q68EA5 555 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 BATF2Q8N1L9 274 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 DYNLRB2Q8TF09 96 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 GABARAPL1Q9H0R8 117 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 IFI27L2Q9H2X8 130 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF221Q9UK13 617 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SAMHD1Q9Y3Z3 626 aaKnown RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 MEX3AA1L020 520 aaKnown RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 TUSC2O75896 110 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SCTP09683 121 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 RAP2AP10114 183 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 PMS2P11Q13670 270 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 TRIM25Q14258 630 aaKnown RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 ANKRD39Q53RE8 183 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 C6orf141Q5SZD1 244 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 MOB1BQ7L9L4 216 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FAM220AQ7Z4H9 259 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SLC25A42Q86VD7 318 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SERPINA12Q8IW75 414 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 SLC38A6Q8IZM9 456 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 OR2G2Q8NGZ5 317 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FAM46BQ96A09 425 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 PELI1Q96FA3 418 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 MRPL48Q96GC5 212 aaKnown RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 RDH12Q96NR8 316 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 FEVQ99581 238 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
SNCA-213ENST00000618500 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
SNCA-213ENST00000618500 TRAV2A0A0B4J234 112 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 TRAV10A0A0B4J240 114 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 H3BN98 237 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RAB29O14966 203 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 CA2P00918 260 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 HBZP02008 142 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 LGALS7P47929 136 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 HCCSP53701 268 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RPS7P62081 194 aaKnown RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 TTC9CQ8N5M4 171 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 ADAD2Q8NCV1 583 aaKnown RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 SETD9Q8NE22 299 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 OR5D14Q8NGL3 314 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RITA1Q96K30 269 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 ZNF556Q9HAH1 456 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 ZNF230Q9UIE0 474 aaPredicted RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 SAA2-SAA4A0A096LPE2 208 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 ZAR1LA6NP61 321 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 GGCTO75223 188 aaKnown RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 SAA2P0DJI9 122 aaPredicted RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 CT45A6P0DMU7 189 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 CT45A5P0DMU8 189 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 CT45A7P0DMV0 189 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RRASP10301 218 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 FOLR2P14207 255 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 CRISP1P54107 249 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RPS16P62249 146 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms