RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CADP27708 2225 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 DVL1O14640 695 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 PGLYRP1O75594 196 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 SIX6O95475 246 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 F12P00748 615 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 CD8AP01732 235 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 HOXB5P09067 269 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 RPA2P15927 270 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 F2RP25116 425 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 EFNA4P52798 201 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 HOXA4Q00056 320 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM187Q14656 261 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 Q3ZCU0 254 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 THOC7Q6I9Y2 204 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 ZNF66Q6ZN08 573 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 LDLRAD3Q86YD5 345 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 RFESDQ8TAC1 157 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 CD300LFQ8TDQ1 290 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 ZNF714Q96N38 554 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 HSD17B10Q99714 261 aaKnown RBP13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 OR2D2Q9H210 308 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 DCAF16Q9NXF7 216 aa13.9□□□□□ -0.19
TRAPPC3-210ENST00000617904 NIPBLQ6KC79 2804 aaeCLIP13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 IGKV1D-13A0A0B4J2D9 117 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 IGHV2-70P01814 119 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 IGKV1-13P0DP09 117 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 COL8A2P25067 703 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 PPP1CCP36873 323 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 GPR6P46095 362 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 GPR12P47775 334 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 H2BFSP57053 126 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 LTC4SQ16873 150 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 MORN2Q502X0 79 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 UBALD1Q8TB05 177 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 C18orf12Q96KH6 178 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 GFOD1Q9NXC2 390 aa13.89□□□□□ -0.19
TRAPPC3-210ENST00000617904 HMSDA8MTL9 139 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 UCP1P25874 307 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM268Q5VZI3 342 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 LINC00574Q9H8X3 128 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 BARX1Q9HBU1 254 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 PRELID3BQ9Y3B1 194 aa13.88□□□□□ -0.19
TRAPPC3-210ENST00000617904 TANC2Q9HCD6 1990 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 CCSO14618 274 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 TNFRSF13BO14836 293 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 RP2O75695 350 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 ZNF16P17020 682 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 NFYBP25208 207 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 PSMB6P28072 239 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 SP6Q3SY56 376 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 INO80EQ8NBZ0 244 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 RRNAD1Q96FB5 475 aaKnown RBP13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 PSG11Q9UQ72 335 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 GAB2Q9UQC2 676 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
TRAPPC3-210ENST00000617904 FXYD6-FXYD2A0A087WZ82 144 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 IGHV3-43A0A0B4J1X8 118 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 L7N2F9 121 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 CDS2O95674 445 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 CGB3P0DN86 165 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 CGB7P0DN87 165 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 IGHV3-43DP0DP04 118 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 SELLP14151 372 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 NKX2-5P52952 324 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 DCAF12L2Q5VW00 463 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 GGNBP1Q5YKI7 109 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 LYPD2Q6UXB3 125 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 OR51H1Q8NH63 302 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 SEC22AQ96IW7 307 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 TP53RKQ96S44 253 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 S1PR3Q99500 378 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 CCL19Q99731 98 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 DCTN5Q9BTE1 182 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 HSPB11Q9Y547 144 aa13.86□□□□□ -0.19
TRAPPC3-210ENST00000617904 SMLR1H3BR10 107 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 RAB29O14966 203 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 TNFSF12O43508 249 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 ADAP1O75689 374 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 SLC25A4P12235 298 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 VDAC1P21796 283 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 IL3RAP26951 378 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 GNMTQ14749 295 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 C17orf58Q2M2W7 97 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 C2orf68Q2NKX9 166 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms