RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 A0A1B0GU03 582 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 FAM24AA6NFZ4 105 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 OMGP23515 440 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 ID4P47928 161 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 GNG12Q9UBI6 72 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 PIGBOS1A0A0B4J2F0 54 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 RAMP3O60896 148 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 PITX3O75364 302 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 GAPDHP04406 335 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 PVALBP20472 110 aaPredicted RBP14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 CAV2P51636 162 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 ADORA2A-AS1P86434 159 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 CDSNQ15517 529 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 OR2C3Q8N628 320 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 LSM10Q969L4 123 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 SAP30LQ9HAJ7 183 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 CACNG5Q9UF02 275 aa14.4□□□□□ -0.1
PCDHGC3-205ENST00000617641 IGSF23A1L1A6 192 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 VSTM5A8MXK1 200 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 B8ZZF3 427 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 FGF16O43320 207 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 TSPAN9O75954 239 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 JTBO76095 146 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 TMEM50AO95807 157 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 LPAR6P43657 344 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 EIF5AP63241 154 aaKnown RBP14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 EWSR1Q01844 656 aaKnown RBP eCLIP14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 Q3ZCU0 254 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 TEX36Q5VZQ5 186 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF788Q6ZQV5 615 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 RNASE6Q93091 150 aaKnown RBP14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 AGMATQ9BSE5 352 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF665Q9H7R5 613 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 CALYQ9NYX4 217 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 OR6C3Q9NZP0 311 aa14.4□□□□□ -0.11
PCDHGC3-205ENST00000617641 PLAUP00749 431 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 IGHV3-7P01780 117 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 SLC25A6P12236 298 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 MUC1P15941 1255 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 CTRB1P17538 263 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 LINC00205P59089 165 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 VAMP2P63027 116 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 FBXL19-AS1Q494R0 122 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 MORN2Q502X0 79 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 CTRB2Q6GPI1 263 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 FGFRL1Q8N441 504 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 TCTEX1D2Q8WW35 142 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 PRORYQ9H606 182 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 COQ3Q9NZJ6 369 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 JPT1Q9UK76 154 aa14.39□□□□□ -0.11
PCDHGC3-205ENST00000617641 WRBO00258 174 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 CHST1O43916 411 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 FBXO24O75426 580 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 CD3EP07766 207 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 FAM157CP0CG43 387 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 LOXL3P58215 753 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 RNF141Q8WVD5 230 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 EGLN1Q9GZT9 426 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 NDRG3Q9UGV2 375 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 RNF115Q9Y4L5 304 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 LRRC30A6NM36 301 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 C17orf98A8MV24 154 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 LGALS8O00214 317 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 F2RL2O00254 374 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 FGF2P09038 288 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 CGB3P0DN86 165 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 CGB7P0DN87 165 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 BRWD1-AS2P59051 145 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF816Q0VGE8 651 aaPredicted RBP14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 MSMO1Q15800 293 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 C17orf58Q2M2W7 97 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 UTF1Q5T230 341 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 OR1S2Q8NGQ3 325 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 DYNLRB1Q9NP97 96 aa14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 LYRM2Q9NU23 88 aaPredicted RBP14.38□□□□□ -0.11
PCDHGC3-205ENST00000617641 PKDREJQ9NTG1 2253 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 KIAA1324LA8MWY0 1029 aaPredicted RBP14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 CLDN1O95832 211 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 CATR1Q13166 79 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 HSD17B13Q7Z5P4 300 aaPredicted RBP14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 LINC00469Q8N7U9 141 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 UBAC2Q8NBM4 344 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 DSCAML1Q8TD84 2053 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 LINC00473A8K010 186 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 A8MXK9 166 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 SIGLEC5O15389 551 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 M6PRP20645 277 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 PAX9P55771 341 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 SPAG16Q8N0X2 631 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 TMEM252Q8N6L7 170 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 AIFM2Q9BRQ8 373 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 NCOR1P1Q9H4R4 102 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 SESN1Q9Y6P5 492 aa14.37□□□□□ -0.11
PCDHGC3-205ENST00000617641 USF3Q68DE3 2245 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 DIDO1Q9BTC0 2240 aaKnown RBP14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 TANC2Q9HCD6 1990 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms