RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 C18orf15Q96N68 181 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 RARRES2Q99969 163 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 CCL27Q9Y4X3 112 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 KIAA1644Q3SXP7 199 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 STPG3Q8N7X2 389 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 OR11H7Q8NGC8 314 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 RNASEH2CQ8TDP1 164 aaKnown RBP5.23□□□□□ -1.57
RFX3-212ENST00000617270 TMEM45BQ96B21 275 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 LINC00615Q96LM1 132 aaPredicted RBP5.23□□□□□ -1.57
RFX3-212ENST00000617270 LIPT2A6NK58 231 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 LAMTOR1Q6IAA8 161 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 NFAM1Q8NET5 270 aaPredicted RBP5.23□□□□□ -1.57
RFX3-212ENST00000617270 DCTN5Q9BTE1 182 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 TLNRD1Q9H1K6 362 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 LHX9Q9NQ69 397 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 FOXJ2Q9P0K8 574 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 WIPI2Q9Y4P8 454 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 DSPPQ9NZW4 1301 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 PHLPP1O60346 1717 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 RPL36A-HNRNPH2H7BZ11 118 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 CEACAM4O75871 244 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 C1QL1O75973 258 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 REG1AP05451 166 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 LHFPL5Q8TAF8 219 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 MS4A5Q9H3V2 200 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 SERGEFQ9UGK8 458 aa5.23□□□□□ -1.57
RFX3-212ENST00000617270 LTN1O94822 1766 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PPIAL4EA0A075B759 164 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ASPDHA6ND91 283 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PGPA6NDG6 321 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PPIAL4DF5H284 164 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 FTH1P19P0C7X4 201 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PPIAL4FP0DN26 164 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 HTN3P15516 51 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 MUC1P15941 1255 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 EFNB2P52799 333 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 UCN2Q96RP3 112 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PPIAL4AQ9Y536 164 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 FOXI3A8MTJ6 420 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 C16orf97H3BN30 126 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 SIGLEC5O15389 551 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 CELA2BP08218 269 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 ADRA2AP08913 450 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 SIGLEC14Q08ET2 396 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 CLEC2AQ6UVW9 174 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 Q6ZNB5 142 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 FAM206AQ9NX38 181 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 KCNE5Q9UJ90 142 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 DLL1O00548 723 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ZNHIT1O43257 154 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ZIC3O60481 467 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 SEC11BP0C7V7 166 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 TCF24Q7RTU0 167 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ZNF784Q8NCA9 323 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 KCNS1Q96KK3 526 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 COL14A1Q05707 1796 aaKnown RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 CA1P00915 261 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 CT62P0C5K7 136 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PSG9Q00887 426 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 FAM106AQ4KMX7 169 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 BIVMQ86UB2 503 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 R3HDMLQ9H3Y0 253 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 IGHV3-35A0A0C4DH35 117 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 A1L4Q6 167 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 EIF3GO75821 320 aaKnown RBP eCLIP5.22□□□□□ -1.57
RFX3-212ENST00000617270 IGFBP6P24592 240 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 RPL8P62917 257 aaKnown RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 APOBEC4Q8WW27 367 aaKnown RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 CHST5Q9GZS9 411 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ZNF430Q9H8G1 570 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 LNP1A1A4G5 178 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 VSIG8P0DPA2 414 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 TSPOP30536 169 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 HBBP68871 147 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 ZNF414Q96IQ9 312 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 SSBP3Q9BWW4 388 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 HSPB1P04792 205 aaKnown RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 ARL14EPLP0DKL9 152 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 PAPPA-AS1Q5QFB9 102 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 DMKNQ6E0U4 476 aaPredicted RBP5.22□□□□□ -1.57
RFX3-212ENST00000617270 RASL10BQ96S79 203 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 V9GYH0 126 aa5.22□□□□□ -1.57
RFX3-212ENST00000617270 FER1L6Q2WGJ9 1857 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 GLULP15104 373 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 LINC00596Q86U02 117 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 NRIP2Q9BQI9 281 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 NPVFQ9HCQ7 196 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 KLK13Q9UKR3 277 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 IGHV3OR16-10A0A075B7F0 116 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 TMEM229AB2RXF0 380 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 PCMT1P22061 227 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 SNRPD3P62318 126 aaKnown RBP5.21□□□□□ -1.57
RFX3-212ENST00000617270 SFTA2Q6UW10 78 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 MSRB3Q8IXL7 192 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 LINC01555Q8NAE3 123 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 ZBTB34Q8NCN2 500 aa5.21□□□□□ -1.57
RFX3-212ENST00000617270 ST6GALNAC6Q969X2 333 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms