RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NDUFAF3Q9BU61 184 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 PLCXD1Q9NUJ7 323 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SULT1A3P0DMM9 295 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SULT1A4P0DMN0 295 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CIRBPQ14011 172 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 DGAT2L6Q6ZPD8 337 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SPNS2Q8IVW8 549 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 MRPL37Q9BZE1 423 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 PLSCR3Q9NRY6 295 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 A0A0A6YYD5 115 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SERTM2A0A1B0GWG4 89 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 FAM221AA4D161 298 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 USF2Q15853 346 aaPredicted RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 OR2B11Q5JQS5 317 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 LINC00482Q8N8I6 264 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 NKAPP1Q8N9T2 125 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 DPCDQ9BVM2 203 aaPredicted RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 BPESC1Q9GZL8 116 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 RAB6CQ9H0N0 254 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TECRQ9NZ01 308 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 IGHV3-43A0A0B4J1X8 118 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 IGHV3-43DP0DP04 118 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CORO6Q6QEF8 472 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 IRF2BP2Q7Z5L9 587 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CEACAM19Q7Z692 300 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 RAB3DO95716 219 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 HPRT1P00492 218 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 UBE2BP63146 152 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 EFNB1P98172 346 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZFP36L1Q07352 338 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 ASCC3Q8N3C0 2202 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 GPR31O00270 319 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 NGFRP08138 427 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 OR5AL1P0C617 328 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZNF674Q2M3X9 581 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CDCP2Q5VXM1 449 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 GPX8Q8TED1 209 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SPTBP11277 2137 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZGRF1Q86YA3 2104 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 MLNRO43193 412 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 PRSS45Q7RTY3 260 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TMEM174Q8WUU8 243 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CCL13Q99616 98 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 OPN4Q9UHM6 478 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TRAV18A0A075B6X5 111 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 DIRAS1O95057 198 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SNAP29O95721 258 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 PTGDSP41222 190 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 C4orf32Q8N8J7 132 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 AQP10Q96PS8 301 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TMA7Q9Y2S6 64 aaKnown RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 PSG1P11464 419 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 HOXD3P31249 432 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 ACAA2P42765 397 aaKnown RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 PIP4P1Q86T03 277 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR1L8Q8NGR8 309 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR13C2Q8NGS9 318 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 EXPH5Q8NEV8 1989 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 A0A1W2PS29 197 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 MST1LQ2TV78 715 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FOXB2Q5VYV0 432 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF774Q6NX45 483 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 GNPNAT1Q96EK6 184 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 VSTM2LQ96N03 204 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 KCNK15Q9H427 330 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 PXMP4Q9Y6I8 212 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CDIPTO14735 213 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 GATA2P23769 480 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 GTF3C1Q12789 2109 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR8G2PQ6IF36 304 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 C11orf44Q8N8P7 122 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CNIH3Q8TBE1 160 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TMEM190Q8WZ59 177 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 MMP24Q9Y5R2 645 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 DNAL4O96015 105 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FGF8P55075 233 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 HAGHQ16775 308 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 LCNL1Q6ZST4 164 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR5AU1Q8NGC0 362 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SMIM19Q96E16 107 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 LSM2Q9Y333 95 aaKnown RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 COL27A1Q8IZC6 1860 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM24AA6NFZ4 105 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SPINT1O43278 529 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 NKX2-1P43699 371 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF137PP52743 207 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 Q8NA96 180 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TMEM255BQ8WV15 326 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR2M2Q96R28 347 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 MSL2Q9HCI7 577 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 PSG11Q9UQ72 335 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 COX11Q9Y6N1 276 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 MMP7P09237 267 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 EMP1P54849 157 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 C9orf40Q8IXQ3 194 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ASXL3Q9C0F0 2248 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ETV3LQ6ZN32 361 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 HYLS1Q96M11 299 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SYNPO2LQ9H987 977 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms