RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 KIR2DS1Q14954 304 aa13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 OR52M1Q8NGK5 317 aa13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 SYT3Q9BQG1 590 aa13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 TRAPPC2LQ9UL33 140 aa13.14□□□□□ -0.31
SEMA3B-212ENST00000616701 SFTA3P0C7M3 94 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 BATFQ16520 125 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 NCR3LG1Q68D85 454 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 FAM53AQ6NSI3 398 aaPredicted RBP13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 LINC00596Q86U02 117 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 ARL11Q969Q4 196 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 FGF16O43320 207 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 PSPNO60542 156 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 IFNA17P01571 189 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 TMEM268Q5VZI3 342 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 OR2Z1Q8NG97 314 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
SEMA3B-212ENST00000616701 TLN1Q9Y490 2541 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 TGOLN2O43493 480 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 HAND1O96004 215 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 UCP3P55916 312 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 HLA-DRB3P79483 266 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 SPRNQ5BIV9 151 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 SLC35G3Q8N808 338 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 CCDC71LQ8N9Z2 235 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 FAM57AQ8TBR7 257 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 GALNT14Q96FL9 552 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 PARP12Q9H0J9 701 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 ERRFI1Q9UJM3 462 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 PLCE1Q9P212 2302 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 SPTBN4Q9H254 2564 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 ADGRG4Q8IZF6 3080 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 TRBV6-7A0A0A0MS04 114 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 PROB1E7EW31 1015 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 NXPH3O95157 252 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 Q6ZS49 121 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 Q8NA96 180 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 AKR1E2Q96JD6 320 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 CXXC4Q9H2H0 198 aa13.12□□□□□ -0.31
SEMA3B-212ENST00000616701 NUDT19A8MXV4 375 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 M0R143 59 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 SH2D1BO14796 132 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 TBR1Q16650 682 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 A0A1W2PPE2 198 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 SOD3P08294 240 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 FAM87AP0C7U9 286 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 LGI3Q8N145 548 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 C18orf12Q96KH6 178 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 DIDO1Q9BTC0 2240 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 PTBP3O95758 552 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 IL2RGP31785 369 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 AESQ08117 197 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 AKR1C8PQ5T2L2 129 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 TMEM108Q6UXF1 575 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 DOLPP1Q86YN1 238 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 Q8IYB0 196 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 OR51H1Q8NH63 302 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
SEMA3B-212ENST00000616701 TUSC2O75896 110 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 OR10A7Q8NGE5 316 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 MUCL1Q96DR8 90 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 NKX2-6A6NCS4 301 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 PPP1R2P9O14990 202 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 KITLGP21583 273 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 TIMP3P35625 211 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 ZNF146Q15072 292 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 ZNF324BQ6AW86 544 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 BOD1Q96IK1 185 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 RBM7Q9Y580 266 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 SPTA1P02549 2419 aa13.1□□□□□ -0.31
SEMA3B-212ENST00000616701 C7orf77A4D0Y5 90 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 HKR1P10072 659 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 CD80P33681 288 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 KRTCAP3Q53RY4 240 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 ZNF880Q6PDB4 577 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 GFRALQ6UXV0 394 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 TMED6Q8WW62 240 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 TAF9BQ9HBM6 251 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 RELNP78509 3460 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 SPRY3O43610 288 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 PET100P0DJ07 73 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 LYL1P12980 280 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 TAGLN2P37802 199 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms