RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, human

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-215	ENST00000616566	KCNIP4	Q6PIL6	250 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	FIP1L1	Q6UN15	594 aa	Known RBP	5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	MOB1B	Q7L9L4	216 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	SSX7	Q7RTT5	188 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	FGFRL1	Q8N441	504 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	OR1P1	Q8NH06	330 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	MBD3L1	Q8WWY6	194 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	LSM10	Q969L4	123 aa	Known RBP	5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	HES7	Q9BYE0	225 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	SVIL	O95425	2214 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566		J3QT63	122 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566		K7ESF4	209 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	CDIPT	O14735	213 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	PDGFB	P01127	241 aa	Predicted RBP	5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	OR3A1	P47881	315 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	NANOS1	Q8WY41	292 aa	Known RBP	5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	OR5P3	Q8WZ94	311 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	OR2D2	Q9H210	308 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	SRD5A3	Q9H8P0	318 aa		5.41	□□□□□ -1.54
PGM3-215	ENST00000616566	TRBV24-1	A0A075B6N3	115 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566		A0A1W2PPV4	95 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	MAGEA5	P43359	124 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	ALKBH2	Q6NS38	261 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	CYP2G1P	Q6ZSU1	146 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	TMEM183A	Q8IXX5	376 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	OR2T10	Q8NGZ9	312 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	TMEM147	Q9BVK8	224 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	ELOVL1	Q9BW60	279 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	PARL	Q9H300	379 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	OBP2B	Q9NPH6	170 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	CTXND1	A0A1B0GTU2	59 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	KBTBD11	O94819	623 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	OR2H2	O95918	312 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	ZNF705D	P0CH99	300 aa	Predicted RBP	5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	ZNF705B	P0CI00	300 aa	Predicted RBP	5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	GABRA2	P47869	451 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	RND2	P52198	227 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	SST	P61278	116 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	H2BFWT	Q7Z2G1	175 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	CXorf67	Q86X51	503 aa	Predicted RBP	5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	DRAM1	Q8N682	238 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	TMEM18	Q96B42	140 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	WFIKKN1	Q96NZ8	548 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	SH2D2A	Q9NP31	389 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	POLDIP2	Q9Y2S7	368 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	PRUNE2	Q8WUY3	3088 aa		5.4	□□□□□ -1.54
PGM3-215	ENST00000616566	SH2D1B	O14796	132 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	IGKV1-39	P01597	117 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	CRYAA	P02489	173 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	IGKV1D-39	P04432	117 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	CD81	P60033	236 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	MRPL49	Q13405	166 aa	Known RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	FAM78B	Q5VT40	261 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	BTNL3	Q6UXE8	466 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	COLCA1	Q6ZS62	124 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	RPP25L	Q8N5L8	163 aa	Known RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	GATAD1	Q8WUU5	269 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	NEIL1	Q96FI4	390 aa	Predicted RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	FAM173A	Q9BQD7	235 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	SPEG	Q15772	3267 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	ZNF320	A2RRD8	509 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	MB	P02144	154 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	SLC25A6	P12236	298 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	EGR1	P18146	543 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	UBE2N	P61088	152 aa	Known RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	DAZAP2	Q15038	168 aa	Predicted RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	LINC00596	Q86U02	117 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	HAPLN4	Q86UW8	402 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	RFESD	Q8TAC1	157 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	CT55	Q8WUE5	264 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	PLPPR2	Q96GM1	343 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	LOXL2	Q9Y4K0	774 aa		5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	COL5A1	P20908	1838 aa	Predicted RBP	5.4	□□□□□ -1.55
PGM3-215	ENST00000616566	GYPA	P02724	150 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	DEFA4	P12838	97 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	SELE	P16581	610 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	HNF1A	P20823	631 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	CEBPD	P49716	269 aa	Predicted RBP	5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	RPL23	P62829	140 aa	Known RBP	5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	TNFRSF9	Q07011	255 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566		Q0VFX4	171 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	RAB24	Q969Q5	203 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	FAM234A	Q9H0X4	552 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	TMEM242	Q9NWH2	141 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	C17orf112	F2Z3M2	114 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	MT-CO3	P00414	261 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	HRAS	P01112	189 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	AMBP	P02760	352 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	FAM3B	P58499	235 aa	Predicted RBP	5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	P2RY6	Q15077	328 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	OR1L1	Q8NH94	360 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	MAFA	Q8NHW3	353 aa	Predicted RBP	5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	DTD1	Q8TEA8	209 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	TMEM45B	Q96B21	275 aa		5.39	□□□□□ -1.55
PGM3-215	ENST00000616566	POM121L2	Q96KW2	1035 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms