RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 ACSF3Q4G176 576 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-212ENST00000615671 C10orf111Q8N326 155 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 PRSS27Q9BQR3 290 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 DDA1Q9BW61 102 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 CACNA1CQ13936 2221 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 TRPM6Q9BX84 2022 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 PCOLCEQ15113 449 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 LINC00299Q6ZSB3 139 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 ABHD12Q8N2K0 398 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 HSPB8Q9UJY1 196 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 TMEM56-RWDD3S4R434 201 aa16.16■□□□□ 0.18
GABPB1-212ENST00000615671 A0A1W2PP11 408 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 A0A1W2PS18 150 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 SLC16A13Q7RTY0 426 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 CXCL3P19876 107 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 UQCRFS1P47985 274 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 CLPPQ16740 277 aaPredicted RBP16.15■□□□□ 0.18
GABPB1-212ENST00000615671 BET1LQ9NYM9 111 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 RALYQ9UKM9 306 aaKnown RBP16.15■□□□□ 0.18
GABPB1-212ENST00000615671 DOCK5Q9H7D0 1870 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 MCM3APO60318 1980 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 ISLRO14498 428 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 PDE6DO43924 150 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 OR2A4O95047 310 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 PGLYRP4Q96LB8 373 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 OR2A7Q96R45 310 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 MEOX2P50222 304 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 HMGA2P52926 109 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 USP54Q70EL1 1684 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 KLRB1Q12918 225 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 REPIN1Q9BWE0 567 aaKnown RBP16.15■□□□□ 0.18
GABPB1-212ENST00000615671 CALYQ9NYX4 217 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 IDI2-AS1Q9NZ38 188 aa16.15■□□□□ 0.18
GABPB1-212ENST00000615671 LINC00869P0C866 280 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 ZNF645Q8N7E2 425 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 YAE1D1Q9NRH1 226 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 MPV17P39210 176 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 SAP25Q8TEE9 199 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 RELBQ01201 579 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 FAM106AQ4KMX7 169 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 WDR25Q64LD2 544 aaPredicted RBP16.14■□□□□ 0.17
GABPB1-212ENST00000615671 VN1R17PQ8TDU5 208 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 OIT3Q8WWZ8 545 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 PHLDA3Q9Y5J5 127 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 IGHV1-69-2A0A0G2JMI3 117 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 OR4C45A6NMZ5 311 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 WDFY2Q96P53 400 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 PLAC1Q9HBJ0 212 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 A0A0B4J293 547 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 GALP22466 123 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 ZNF56Q15929 161 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 FDCSPQ8NFU4 85 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 KCNK17Q96T54 332 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 CCL27Q9Y4X3 112 aa16.14■□□□□ 0.17
GABPB1-212ENST00000615671 MGST3O14880 152 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 NUDT3O95989 172 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 CD74P04233 296 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 CRHP06850 196 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 RBKSQ9H477 322 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 VSIG10L2P0DP72 767 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 CX3CL1P78423 397 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 RAB33BQ9H082 229 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 PSMB11A5LHX3 300 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 PGA4P0DJD7 388 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 LYRM2Q9NU23 88 aaPredicted RBP16.13■□□□□ 0.17
GABPB1-212ENST00000615671 RREB1Q92766 1687 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 COMPP49747 757 aaPredicted RBP16.13■□□□□ 0.17
GABPB1-212ENST00000615671 SCAND1P57086 179 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 PCSK4Q6UW60 755 aa16.13■□□□□ 0.17
GABPB1-212ENST00000615671 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
GABPB1-212ENST00000615671 GPX1P07203 203 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 NANOS3P60323 173 aaKnown RBP16.12■□□□□ 0.17
GABPB1-212ENST00000615671 HSPB7Q9UBY9 170 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 IFITM10A6NMD0 228 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 NEU1Q99519 415 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 SLC25A33Q9BSK2 321 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 CXorf66Q5JRM2 361 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-212ENST00000615671 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-212ENST00000615671 CBLN2Q8IUK8 224 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 ITLN2Q8WWU7 325 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-212ENST00000615671 RAXQ9Y2V3 346 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 PAM16Q9Y3D7 125 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 PPP1R17O96001 155 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 HSPB1P04792 205 aaKnown RBP16.12■□□□□ 0.17
GABPB1-212ENST00000615671 SCGB1A1P11684 91 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 RND2P52198 227 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 P2RY6Q15077 328 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 OR5AU1Q8NGC0 362 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 ANGPTL4Q9BY76 406 aa16.12■□□□□ 0.17
GABPB1-212ENST00000615671 PGPA6NDG6 321 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 RPL8P62917 257 aaKnown RBP16.11■□□□□ 0.17
GABPB1-212ENST00000615671 CALHM1Q8IU99 346 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 COX6A1P12074 109 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 MRPL30Q8TCC3 161 aaKnown RBP16.11■□□□□ 0.17
GABPB1-212ENST00000615671 LOXL4Q96JB6 756 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 MIOXQ9UGB7 285 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 DLX6P56179 175 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 ELOVL1Q9BW60 279 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 IGKV1-8A0A0C4DH67 115 aa16.11■□□□□ 0.17
GABPB1-212ENST00000615671 C9JCJ5 164 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms