RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 MRGPRX4Q96LA9 322 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 BOKQ9UMX3 212 aaPredicted RBP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 MAP1LC3B2A6NCE7 125 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 H3BML4 177 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 CBR3O75828 277 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 TRAPPC6AO75865 159 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 CD55P08174 381 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 OTX1P32242 354 aaPredicted RBP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 ERVS71-1P61550 626 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 RPL23P62829 140 aaKnown RBP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 ZNF726P1Q15940 193 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 RNFT1Q5M7Z0 435 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 RAET1LQ5VY80 246 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 PRR18Q8N4B5 295 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 OXGR1Q96P68 337 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 MAP1LC3BQ9GZQ8 125 aa18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 OPN3Q9H1Y3 402 aaPredicted RBP18.67■□□□□ 0.58
POLR2J3-220ENST00000613744 CELA3AP09093 270 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 TUBG1P23258 451 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 GDF1P27539 372 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 GNRHRP30968 328 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 MDH2P40926 338 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 DSCR4P56555 118 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM41BQ5BJD5 291 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 LCN15Q6UWW0 184 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 OR5D13Q8NGL4 314 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 POC1BQ8TC44 478 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 REPIN1Q9BWE0 567 aaKnown RBP18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 FUT9Q9Y231 359 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 CACNA1BQ00975 2339 aa18.66■□□□□ 0.58
POLR2J3-220ENST00000613744 LOC102725191A0A1B0GVB3 256 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 C5orf63A6NC05 138 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 ZNF205O95201 554 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 MAGEA5P43359 124 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 ELLP55199 621 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 MYBPHQ13203 477 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 KCNIP4Q6PIL6 250 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 LHFPL2Q6ZUX7 228 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 PCGF1Q9BSM1 259 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 MED12Q93074 2177 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 PDCD6O75340 191 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 WISP2O76076 250 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 MMP7P09237 267 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 NPSP0C0P6 89 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 ZNF92Q03936 586 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 DMRTC1Q5HYR2 192 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 PCSK4Q6UW60 755 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 YRDCQ86U90 279 aaKnown RBP18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 TMEM37Q8WXS4 190 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 TAAR6Q96RI8 345 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 MIEN1Q9BRT3 115 aa18.65■□□□□ 0.58
POLR2J3-220ENST00000613744 ATRXP46100 2492 aa18.64■□□□□ 0.58
POLR2J3-220ENST00000613744 SOX15O60248 233 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 VENTXO95231 258 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 MSR1P21757 451 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 MEF2BQ02080 365 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 MALLQ13021 153 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 OSR2Q8N2R0 312 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 TMEM251Q8N6I4 163 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 EFNA2O43921 213 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF737O75373 536 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 HPRT1P00492 218 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 GUCA1AP43080 201 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 UBE2NP61088 152 aaKnown RBP18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 FOXL2NBQ6ZUU3 175 aa18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF703Q9H7S9 590 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-220ENST00000613744 ZIC3O60481 467 aa18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 TNFSF13O75888 250 aa18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 RPL29P47914 159 aaKnown RBP18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 MRPS34P82930 218 aaKnown RBP18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 C21orf62-AS1Q17RA5 79 aa18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 WIPI1Q5MNZ9 446 aaPredicted RBP18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF385AQ96PM9 386 aaKnown RBP18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 DEFB127Q9H1M4 99 aa18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 RBKSQ9H477 322 aa18.63■□□□□ 0.57
POLR2J3-220ENST00000613744 H0Y980 276 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 LRRC75BQ2VPJ9 315 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF705AQ6ZN79 300 aaPredicted RBP18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 C17orf78Q8N4C9 275 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 Q8NA96 180 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 PLK3Q9H4B4 646 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 A0A1W2PPQ1 181 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 F5H5K5 113 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 ANGPTL7O43827 346 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 HLA-HP01893 362 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 CARD17Q5XLA6 110 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 NECAP1Q8NC96 275 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 TAAR3PQ9P1P4 343 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 EPG5Q9HCE0 2579 aa18.62■□□□□ 0.57
POLR2J3-220ENST00000613744 TLN1Q9Y490 2541 aaKnown RBP18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 SRD5A2P31213 254 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 BRS3P32247 399 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 ARSJQ5FYB0 599 aaPredicted RBP18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 C10orf128Q5T292 105 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 SPTSSAQ969W0 71 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 MS4A10Q96PG2 267 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 LPAR2Q9HBW0 351 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 B4GALT7Q9UBV7 327 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 TIMM9Q9Y5J7 89 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 M0R135 149 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms