RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 KCNG3Q8TAE7 436 aa12.45□□□□□ -0.42
SGMS1-209ENST00000609445 TM2D1Q9BX74 207 aa12.45□□□□□ -0.42
SGMS1-209ENST00000609445 ABRACLQ9P1F3 81 aa12.45□□□□□ -0.42
SGMS1-209ENST00000609445 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
SGMS1-209ENST00000609445 LRRC42Q9Y546 428 aa12.45□□□□□ -0.42
SGMS1-209ENST00000609445 SOCS1O15524 211 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 NDUFA3O95167 84 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 UCHL1P09936 223 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 P2RY14Q15391 338 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 ZNF260Q3ZCT1 412 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 NPBQ8NG41 125 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 OR1N2Q8NGR9 330 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 TMEM203Q969S6 136 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 ABHD14BQ96IU4 210 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 UBE2E2Q96LR5 201 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 GFI1Q99684 422 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 FBXL15Q9H469 300 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■■■ 27
SGMS1-209ENST00000609445 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 VSIG4Q9Y279 399 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 LSM4Q9Y4Z0 139 aaKnown RBP12.44□□□□□ -0.42
SGMS1-209ENST00000609445 RYR3Q15413 4870 aa12.44□□□□□ -0.42
SGMS1-209ENST00000609445 CT45A6P0DMU7 189 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 CT45A5P0DMU8 189 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 CT45A7P0DMV0 189 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 CD37P11049 281 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
SGMS1-209ENST00000609445 IRF3Q14653 427 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 ECSCRQ19T08 205 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 LIPKQ5VXJ0 399 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 CASTOR1Q8WTX7 329 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 WWC2-AS2Q96NR7 200 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 ALX4Q9H161 411 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-209ENST00000609445 LPAR5Q9H1C0 372 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 PLEKHJ1Q9NW61 149 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 OR1A1Q9P1Q5 309 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 NKX1-2Q9UD57 310 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-209ENST00000609445 SLC23A1Q9UHI7 598 aa12.43□□□□□ -0.42
SGMS1-209ENST00000609445 RRHO14718 337 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 SOX15O60248 233 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 BPNT1O95861 308 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 RAB9AP51151 201 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 RUNX1Q01196 453 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 ZNF616Q08AN1 781 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 C19orf54Q5BKX5 351 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 FAM71F2Q6NXP2 309 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 TMEM91Q6ZNR0 172 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 MOB1BQ7L9L4 216 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 MINDY2Q8NBR6 621 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 OR6M1Q8NGM8 313 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 ASCL2Q99929 193 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 VCXQ9H320 206 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 PIPOXQ9P0Z9 390 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 A3GALT2U3KPV4 340 aa12.42□□□□□ -0.42
SGMS1-209ENST00000609445 A0A1W2PN81 502 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 H0YJW9 148 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 FCN1O00602 326 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 RAB29O14966 203 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 CHRNA7P36544 502 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 AQP4P55087 323 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
SGMS1-209ENST00000609445 CX3CL1P78423 397 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 HLA-DRB3P79483 266 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 UFD1Q92890 307 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 AGMATQ9BSE5 352 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 C11orf54Q9H0W9 315 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-209ENST00000609445 PLGRKTQ9HBL7 147 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 SCN3BQ9NY72 215 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 GAB2Q9UQC2 676 aa12.41□□□□□ -0.42
SGMS1-209ENST00000609445 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
SGMS1-209ENST00000609445 TRBV6-6A0A0A6YYG2 114 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
SGMS1-209ENST00000609445 SLC17A2O00624 439 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 LY86O95711 162 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 SCTP09683 121 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 HSMCR30P0CW71 290 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
SGMS1-209ENST00000609445 CLDN12P56749 244 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 LINC00205P59089 165 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 PLGLAQ15195 96 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 ABHD5Q8WTS1 349 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 NRG4Q8WWG1 115 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 CLCC1Q96S66 551 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 RNF150Q9ULK6 438 aa12.4□□□□□ -0.42
SGMS1-209ENST00000609445 ZNF256Q9Y2P7 627 aaPredicted RBP12.4□□□□□ -0.42
SGMS1-209ENST00000609445 OR5H14A6NHG9 310 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 H7C2Y5 167 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 PROP1O75360 226 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 GSTP1P09211 210 aaKnown RBP12.39□□□□□ -0.43
SGMS1-209ENST00000609445 NHLRC4P0CG21 123 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-209ENST00000609445 ARSBP15848 533 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 CEACAM6P40199 344 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 VEGFCP49767 419 aa12.39□□□□□ -0.43
SGMS1-209ENST00000609445 CRIP2P52943 208 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms