RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
CTSA-211ENST00000606066 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
CTSA-211ENST00000606066 SCPEP1Q9HB40 452 aa11.48□□□□□ -0.57
CTSA-211ENST00000606066 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
CTSA-211ENST00000606066 IGKV1D-8A0A087WSZ0 117 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 IGHV1-3A0A0C4DH29 117 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 A6NDX4 124 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 CTDSP2O14595 271 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 TIMM23O14925 209 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 ST8SIA5O15466 376 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 LANCL1O43813 399 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 HKR1P10072 659 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 PTHLHP12272 177 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 REG1BP48304 166 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 THNSL2Q86YJ6 484 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 CAPSLQ8WWF8 208 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 AKR1E2Q96JD6 320 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 C11orf54Q9H0W9 315 aaPredicted RBP11.47□□□□□ -0.57
CTSA-211ENST00000606066 IFI27L2Q9H2X8 130 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 RABL2AQ9UBK7 228 aaPredicted RBP11.47□□□□□ -0.57
CTSA-211ENST00000606066 ZNF221Q9UK13 617 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 RABL2BQ9UNT1 228 aa11.47□□□□□ -0.57
CTSA-211ENST00000606066 SULT1C2O00338 296 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 FOXL1Q12952 345 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 C16orf82Q7Z2V1 217 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 SNX29P2Q8IUI4 249 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 LAX1Q8IWV1 398 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 ODF3L1Q8IXM7 274 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 DRAM1Q8N682 238 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 GVQW1Q8N7I0 195 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 OR56B4Q8NH76 319 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 AGMATQ9BSE5 352 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 DCUN1D5Q9BTE7 237 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 NECAP2Q9NVZ3 263 aa11.46□□□□□ -0.57
CTSA-211ENST00000606066 RBM7Q9Y580 266 aaKnown RBP11.46□□□□□ -0.57
CTSA-211ENST00000606066 SAA2-SAA4A0A096LPE2 208 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 TMEM89A2RUT3 159 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 DPPA5A6NC42 116 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 MEIS3P1A6NDR6 274 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 FAM90A9PA6NNJ1 464 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 SAA2P0DJI9 122 aaPredicted RBP11.45□□□□□ -0.58
CTSA-211ENST00000606066 GPR12P47775 334 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 HES1Q14469 280 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 HABP2Q14520 560 aaPredicted RBP11.45□□□□□ -0.58
CTSA-211ENST00000606066 ZNF833PQ6ZTB9 187 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 H1FOOQ8IZA3 346 aaPredicted RBP11.45□□□□□ -0.58
CTSA-211ENST00000606066 OR4F5Q8NH21 305 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 GPX8Q8TED1 209 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 CFHR4Q92496 578 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 DIRAS2Q96HU8 199 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 NXF2Q9GZY0 626 aaKnown RBP11.45□□□□□ -0.58
CTSA-211ENST00000606066 PARP12Q9H0J9 701 aaKnown RBP11.45□□□□□ -0.58
CTSA-211ENST00000606066 MIXL1Q9H2W2 232 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 MMP27Q9H306 513 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 A3GALT2U3KPV4 340 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
CTSA-211ENST00000606066 TRRAPQ9Y4A5 3859 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 NDUFA7O95182 113 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 SNRNP70P08621 437 aaKnown RBP11.44□□□□□ -0.58
CTSA-211ENST00000606066 OR8U9P0C7N5 309 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 CD24P25063 80 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 CD1BP29016 333 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 OR3A3P47888 321 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 CCBE1Q6UXH8 406 aaPredicted RBP11.44□□□□□ -0.58
CTSA-211ENST00000606066 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
CTSA-211ENST00000606066 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 OR8U1Q8NH10 309 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 ABHD14BQ96IU4 210 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 RNF150Q9ULK6 438 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 GAB2Q9UQC2 676 aa11.44□□□□□ -0.58
CTSA-211ENST00000606066 A0A1B0GUS0 222 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 M0QZK8 103 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 OR2F2O95006 317 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 FCER2P06734 321 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 TMEM11P17152 192 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 NAT1P18440 290 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 S100A5P33763 92 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 RCVRNP35243 200 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 RAG2P55895 527 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 TAS2R46P59540 309 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 MRPS10P82664 201 aaKnown RBP11.43□□□□□ -0.58
CTSA-211ENST00000606066 CDK10Q15131 360 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 PYHIN1Q6K0P9 492 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 OR4C13Q8NGP0 309 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 OR2T10Q8NGZ9 312 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 FCAMRQ8WWV6 532 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 SNAPC3Q92966 411 aa11.43□□□□□ -0.58
CTSA-211ENST00000606066 RBM14Q96PK6 669 aaKnown RBP11.43□□□□□ -0.58
CTSA-211ENST00000606066 SLC25A33Q9BSK2 321 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms