RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TMEM50AO95807 157 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 HLA-DRB1P01911 266 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SERPINA7P05543 415 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 LINC00869P0C866 280 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF17P17021 662 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 KITLGP21583 273 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 CCR2P41597 374 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 CDC34P49427 236 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR1D5P58170 312 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 PPP1CBP62140 327 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGLV3-21P80748 117 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 FOXI1Q12951 378 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TCEA2Q15560 299 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 MLF2Q15773 248 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 BATFQ16520 125 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 ABCA11PQ4W5N1 156 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 LDLRAD2Q5SZI1 272 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM211Q6ICI0 200 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 UFSP1Q6NVU6 142 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 MRPL54Q6P161 138 aaKnown RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 WDR73Q6P4I2 378 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 UNQ5815/PRO19632Q6UWF5 114 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 C12orf54Q6X4T0 127 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 COLCA1Q6ZS62 124 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 MARCH3Q86UD3 253 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 VASH2Q86V25 355 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TCEAL8Q8IYN2 117 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM123Q8N131 208 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC39A11Q8N1S5 342 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 C2orf73Q8N5S3 287 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF525Q8N782 197 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF709Q8N972 641 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 FER1L6-AS1Q8NA97 138 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SCCPDHQ8NBX0 429 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 Q8NFD4 153 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR52L2PQ8NGH6 319 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR51T1Q8NGJ9 327 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 MRPL30Q8TCC3 161 aaKnown RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 ASB10Q8WXI3 467 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR1E3Q8WZA6 343 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 BCL2L2Q92843 193 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 NUS1Q96E22 293 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR2A5Q96R48 311 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TAAR6Q96RI8 345 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM204Q9BSN7 226 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 RSG1Q9BU20 258 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SFXN3Q9BWM7 321 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 PBOV1Q9GZY1 135 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 LIME1Q9H400 295 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 HES4Q9HCC6 221 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 NRN1Q9NPD7 142 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLSCR4Q9NRQ2 329 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 STARD5Q9NSY2 213 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC39A9Q9NUM3 307 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 PILRAQ9UKJ1 303 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 HEBP2Q9Y5Z4 205 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 RFNGQ9Y644 331 aa3.44□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGKV1D-8A0A087WSZ0 117 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A1B0GV50 99 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A1W2PQD3 144 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 A0A1W2PS18 150 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 MED19A0JLT2 244 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZFP92A6NM28 416 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 C4orf47A7E2U8 309 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF878C9JN71 531 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A26D6RGX4 464 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRAPPC2LH3BP13 241 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 M0QZ24 198 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PLPP3O14495 311 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CRXO43186 299 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR7C2O60412 319 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ONECUT2O95948 504 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HLA-DQA2P01906 255 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CT62P0C5K7 136 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10J4P0C629 311 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CTLA4P16410 223 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HNRNPA2B1P22626 353 aaKnown RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 NPPCP23582 126 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 NPY1RP25929 384 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR1D2P34982 312 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CDKN1AP38936 164 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC11A1P49279 550 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 LGALS4P56470 323 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF121P58317 390 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SELENOVP59797 346 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HBG1P69891 147 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HBG2P69892 147 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CCL7P80098 99 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FUT7Q11130 342 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SCGB2A2Q13296 93 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HIST3H3Q16695 136 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM110CQ1W6H9 321 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 HLA-DRB5Q30154 266 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SP6Q3SY56 376 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CXorf66Q5JRM2 361 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SPIN3Q5JUX0 258 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM162BQ5T6X4 162 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM78BQ5VT40 261 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 STUMQ69YW2 141 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms