RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 KCNIP4Q6PIL6 250 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 Q8NFD4 153 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 MS4A10Q96PG2 267 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 TBX15Q96SF7 602 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 OR2H1Q9GZK4 316 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 AKIRIN1Q9H9L7 192 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 PATE3B3GLJ2 98 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 DUSP3P51452 185 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 FGF12P61328 243 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 ZNF324BQ6AW86 544 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 MYPOPQ86VE0 399 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 ZDHHC23Q8IYP9 409 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 TRAPPC1Q9Y5R8 145 aa16.4■□□□□ 0.22
ARHGEF1-218ENST00000599589 TP53I11O14683 189 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNHIT1O43257 154 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 CER1O95813 267 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 CST9LP1Q5W188 147 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 OR10J5Q8NHC4 309 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 TECTBQ96PL2 329 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 FGF23Q9GZV9 251 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 DOCK11Q5JSL3 2073 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 HPRT1P00492 218 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 GPM6AP51674 278 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 RPL15P61313 204 aaKnown RBP16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 LSM10Q969L4 123 aaKnown RBP16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 SDSLQ96GA7 329 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 PARD6GQ9BYG4 376 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 WDR54Q9H977 334 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 CRIM1Q9NZV1 1036 aa16.39■□□□□ 0.21
ARHGEF1-218ENST00000599589 A0A0U1RQK1 487 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNF320A2RRD8 509 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 CELA2AP08217 269 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNF16P17020 682 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 GCH1P30793 250 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNF573Q86YE8 665 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 AURKAIP1Q9NWT8 199 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 C1QTNF9BB2RNN3 333 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZIC3O60481 467 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 PAGE4O60829 102 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 CD33P20138 364 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 TRA2AQ13595 282 aaKnown RBP eCLIP16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 C1orf210Q8IVY1 113 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 MTCH1Q9NZJ7 389 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 PPP1R3CQ9UQK1 317 aa16.38■□□□□ 0.21
ARHGEF1-218ENST00000599589 CTXND1A0A1B0GTU2 59 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 M0QZK8 103 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 NTN3O00634 580 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 IRF2P14316 349 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 AGBL5Q8NDL9 886 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 OR10G9Q8NGN4 311 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 OR10G7Q8NGN6 311 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 IL1F10Q8WWZ1 152 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 WDR87Q6ZQQ6 2873 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 SDK2Q58EX2 2172 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 GDF9O60383 454 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 OR56B2PQ8NGI1 322 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 FOXB1Q99853 325 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 MANBALQ9NQG1 85 aa16.37■□□□□ 0.21
ARHGEF1-218ENST00000599589 HS3ST1O14792 307 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 CCL3P10147 92 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 LCN2P80188 198 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 CPT1CQ8TCG5 803 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZCCHC14Q8WYQ9 949 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 NEIL1Q96FI4 390 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 OR1A1Q9P1Q5 309 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 CBY1Q9Y3M2 126 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 TIMM9Q9Y5J7 89 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 C3orf80F5H4A9 247 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 VENTXO95231 258 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 LIFP15018 202 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 SPINK2P20155 84 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 NPPCP23582 126 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 PMP22Q01453 160 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 PRDX4Q13162 271 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 CEACAM16Q2WEN9 425 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 TDRG1Q3Y452 100 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 PXMP4Q9Y6I8 212 aa16.36■□□□□ 0.21
ARHGEF1-218ENST00000599589 DIDO1Q9BTC0 2240 aaKnown RBP16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 IGLV2-14P01704 120 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 DSCR4P56555 118 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 TOMM20LQ6UXN7 152 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 RDH5Q92781 318 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 WDYHV1Q96HA8 205 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 LOC102723996A0A087X1L8 192 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 PIGBOS1A0A0B4J2F0 54 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 CLDN1O95832 211 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 DEFA4P12838 97 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 EGR1P18146 543 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 PPP1CBP62140 327 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 GAGE1Q13065 139 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 PARD6AQ9NPB6 346 aa16.35■□□□□ 0.21
ARHGEF1-218ENST00000599589 TRAPPC2LH3BP13 241 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 PCOLCEQ15113 449 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNF585BQ52M93 769 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 AAED1Q7RTV5 226 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 SPSB4Q96A44 273 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 FFAR4Q5NUL3 377 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 SLC23A3Q6PIS1 610 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 TCF23Q7RTU1 214 aa16.34■□□□□ 0.21
ARHGEF1-218ENST00000599589 ZNF488Q96MN9 340 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms