RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 GCGP01275 180 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 COX6CP09669 75 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 IFITM3Q01628 133 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 CALHM1Q8IU99 346 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 NUDT16L1Q9BRJ7 211 aaKnown RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 CDC42EP3Q9UKI2 254 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 PGPA6NDG6 321 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 SOD3P08294 240 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 ADRA2AP08913 450 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 LSM10Q969L4 123 aaKnown RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 METTL26Q96S19 204 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 CA11O75493 328 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 EMP1P54849 157 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM252Q8N6L7 170 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 OR4A5Q8NH83 315 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 OPN3Q9H1Y3 402 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 PATE3B3GLJ2 98 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 SS18L1O75177 396 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 PLPPR5Q32ZL2 321 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 PUSL1Q8N0Z8 303 aaKnown RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-208ENST00000599343 SERF2P84101 59 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 PSG4Q00888 419 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 AKAP11Q9UKA4 1901 aa10.25□□□□□ -0.77
SCN8A-208ENST00000599343 LMX1BO60663 402 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 PTP4A3O75365 173 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-208ENST00000599343 PRSS27Q9BQR3 290 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 KLK15Q9H2R5 256 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 RAXQ9Y2V3 346 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 KIF13AQ9H1H9 1805 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 H0YL77 283 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 AMY1AP04745 511 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ID4P47928 161 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 GGTLC2Q14390 218 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF273Q14593 569 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ISXQ2M1V0 245 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 SCNM1Q9BWG6 230 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 H0Y980 276 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CCL21O00585 134 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ZIC3O60481 467 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 OR2H2O95918 312 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 HKR1P10072 659 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 SLC25A53Q5H9E4 307 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ATOH7Q8N100 152 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF645Q8N7E2 425 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 SPAARA0A1B0GVQ0 90 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CXorf65A6NEN9 183 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 H3BTX0 84 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 LRRC3BQ96PB8 259 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 AHDC1Q5TGY3 1603 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-208ENST00000599343 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 LEPROTL1O95214 131 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CELA2AP08217 269 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 PF4V1P10720 104 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CEACAM21Q3KPI0 293 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF826PQ6ZT77 177 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 SGK494Q96LW2 274 aa10.24□□□□□ -0.77
SCN8A-208ENST00000599343 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-208ENST00000599343 PRSS2P07478 247 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 GPR6P46095 362 aaPredicted RBP10.23□□□□□ -0.77
SCN8A-208ENST00000599343 PARLQ9H300 379 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 TUBD1Q9UJT1 453 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 C7orf71A4D174 169 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 C21orf140B9A014 251 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
SCN8A-208ENST00000599343 FCGR2BP31994 310 aaPredicted RBP10.23□□□□□ -0.77
SCN8A-208ENST00000599343 GCSAMLQ5JQS6 135 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 DCAF10Q5QP82 559 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 A0A0J9YW62 118 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 C7orf66A4D0T2 115 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 NMBP08949 121 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 GZMMP51124 257 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 ERVFRD-1P60508 538 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM177Q53S58 311 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 OR10S1Q8NGN2 331 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 PLAURQ03405 335 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
SCN8A-208ENST00000599343 SH3BGRL3Q9H299 93 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 NINQ8N4C6 2090 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 DLL1O00548 723 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 FOXS1O43638 330 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
SCN8A-208ENST00000599343 OR4B1Q8NGF8 309 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM222Q9H0R3 208 aa10.23□□□□□ -0.77
SCN8A-208ENST00000599343 BEX4Q9NWD9 120 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms