RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 IFITM3Q01628 133 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 REG3AQ06141 175 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 ABCA11PQ4W5N1 156 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 MORN2Q502X0 79 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 AWAT2Q6E213 333 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 SBSNQ6UWP8 590 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 ACP7Q6ZNF0 438 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 Q6ZRP5 223 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 Q6ZSR6 202 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 GGNQ86UU5 652 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 SGPP2Q8IWX5 399 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 C11orf53Q8IXP5 236 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 PDZD9Q8IXQ8 264 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 SLC25A45Q8N413 288 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 OR5W2Q8NH69 310 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 OR4C6Q8NH72 309 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 SIGLEC12Q96PQ1 595 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 TSPAN32Q96QS1 320 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 NDFIP1Q9BT67 221 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 MRPL20Q9BYC9 149 aaKnown RBP4.06□□□□□ -1.76
PAF1-208ENST00000598594 EIF5A2Q9GZV4 153 aaKnown RBP4.06□□□□□ -1.76
PAF1-208ENST00000598594 DEFB127Q9H1M4 99 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 CDC42EP4Q9H3Q1 356 aaKnown RBP4.06□□□□□ -1.76
PAF1-208ENST00000598594 SLCO1B3Q9NPD5 702 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 MARCH5Q9NX47 278 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 TBX21Q9UL17 535 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 POMPQ9Y244 141 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 LAMTOR2Q9Y2Q5 125 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 PCYT1BQ9Y5K3 369 aaPredicted RBP4.06□□□□□ -1.76
PAF1-208ENST00000598594 UBR2Q8IWV8 1755 aa4.06□□□□□ -1.76
PAF1-208ENST00000598594 NOS1P29475 1434 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 SBF1O95248 1867 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 ECM29Q5VYK3 1845 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 IGHV2-26A0A0B4J1V2 119 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 A0A0X1KG70 313 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 LOC102725191A0A1B0GVB3 256 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 DUXBA0A1W2PPF3 345 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 RIIAD1A6NNX1 92 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 M0R2Z0 102 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 GYPCP04921 128 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 CECR9P0C854 216 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 IL2RGP31785 369 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 EIF2B2P49770 351 aaKnown RBP4.05□□□□□ -1.76
PAF1-208ENST00000598594 ZNF140P52738 457 aaPredicted RBP4.05□□□□□ -1.76
PAF1-208ENST00000598594 NCS1P62166 190 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 C16orf72Q14CZ0 275 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 RBMY1FQ15415 496 aaKnown RBP4.05□□□□□ -1.76
PAF1-208ENST00000598594 TGIF1Q15583 401 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 SSX1Q16384 188 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 TIMM50Q3ZCQ8 353 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 FBXL19-AS1Q494R0 122 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 ZNF404Q494X3 552 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 NXNL2Q5VZ03 156 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 TCF23Q7RTU1 214 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 YTHDF3Q7Z739 585 aaKnown RBP4.05□□□□□ -1.76
PAF1-208ENST00000598594 ZIC4Q8N9L1 334 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 DCAF4L2Q8NA75 395 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 OR4E2Q8NGC2 313 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 OR2G3Q8NGZ4 309 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 SLC7A6Q92536 515 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 STARD4Q96DR4 205 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 PBOV1Q9GZY1 135 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 RPS6KB2Q9UBS0 482 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 TRAPPC2LQ9UL33 140 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 ZNF638Q14966 1978 aaKnown RBP4.05□□□□□ -1.76
PAF1-208ENST00000598594 NUP210LQ5VU65 1888 aa4.05□□□□□ -1.76
PAF1-208ENST00000598594 COL11A2P13942 1736 aaPredicted RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 RAI1Q7Z5J4 1906 aaPredicted RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 IGKV1-27A0A075B6S5 117 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 TRAV8-1A0A0A6YYK1 113 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 A0A0J9YY10 115 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 A0A1B0GX78 115 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 C9JAW5 83 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 SAP18O00422 153 aaKnown RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 TRAF3IP2O43734 574 aaPredicted RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 ANGPTL7O43827 346 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 EVI2AP22794 236 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 PPP1CCP36873 323 aaKnown RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 ATP5G3P48201 142 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 TAF6P49848 677 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 MP68P56378 58 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 PPP3R1P63098 170 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 SRSF4Q08170 494 aaKnown RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 MMDQ15546 238 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 ZFP69Q49AA0 526 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 DNAJC24Q6P3W2 148 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 FBXW12Q6X9E4 464 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 RNF165Q6ZSG1 346 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 PRNTQ86SH4 94 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 NFE4Q86UQ8 179 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 KRTCAP2Q8N6L1 136 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 ZNF433Q8N7K0 673 aaPredicted RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 TMEM229BQ8NBD8 167 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 NUP37Q8NFH4 326 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 OR2T27Q8NH04 317 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 ISOC1Q96CN7 298 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 ZNF184Q99676 751 aaPredicted RBP4.04□□□□□ -1.76
PAF1-208ENST00000598594 ANAPC13Q9BS18 74 aa4.04□□□□□ -1.76
PAF1-208ENST00000598594 TMEM243Q9BU79 118 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms