RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 VENTXO95231 258 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 AADACP22760 399 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 LDLRAD2Q5SZI1 272 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 TERB2Q8NHR7 220 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 PRRT1Q99946 306 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
TRIM28-207ENST00000597136 SUCNR1Q9BXA5 334 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 HEXA-AS1Q9H8Q6 139 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 STAB1Q9NY15 2570 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 TENM1Q9UKZ4 2725 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 IFNA2P01563 188 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV3-7P01780 117 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 SAA4P35542 130 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 CCR6P51684 374 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 SCGB2B2Q4G0G5 96 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 NCR3LG1Q68D85 454 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 LEAP2Q969E1 77 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 DUX5Q96PT3 197 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 TMEM133Q9H2Q1 129 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 SCP2D1Q9UJQ7 156 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 OR2W1Q9Y3N9 320 aa12.17□□□□□ -0.46
TRIM28-207ENST00000597136 A0A087X0M5 115 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 A0A1B0GX30 115 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 RGS11O94810 467 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 PPYP01298 95 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 SLC6A1P30531 599 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 LY6G6FQ5SQ64 297 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 AADACL3Q5VUY0 350 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 MRGPRFQ96AM1 343 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 PSG11Q9UQ72 335 aa12.16□□□□□ -0.46
TRIM28-207ENST00000597136 IGKV1D-13A0A0B4J2D9 117 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 OR5H14A6NHG9 310 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 TCF21O43680 179 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 IGKV1-13P0DP09 117 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 CD34P28906 385 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 ZNF134P52741 427 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 BPIFB3P59826 476 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 HERV-K104P61576 105 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 Q3ZCU0 254 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 NRARPQ7Z6K4 114 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 LDLRAD3Q86YD5 345 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 ABHD12Q8N2K0 398 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 ZDHHC22Q8N966 263 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 OR13C8Q8NGS7 320 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV2-26A0A0B4J1V2 119 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 ITGB1BP1O14713 200 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 FXYD4P59646 89 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 CT45A1Q5HYN5 189 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 CT45A3Q8NHU0 189 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 ZNF418Q8TF45 676 aaPredicted RBP12.14□□□□□ -0.47
TRIM28-207ENST00000597136 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 AGMATQ9BSE5 352 aa12.14□□□□□ -0.47
TRIM28-207ENST00000597136 A0A1W2PPE3 182 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ODF3BA8MYP8 253 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 SLC31A2O15432 143 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 PTTG1O95997 202 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ARG1P05089 322 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 GNG10P50151 68 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 LUMP51884 338 aaPredicted RBP12.13□□□□□ -0.47
TRIM28-207ENST00000597136 HILS1P60008 231 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 RBMS2Q15434 407 aaKnown RBP12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ZNF626Q68DY1 528 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 SLC25A48Q6ZT89 311 aaKnown RBP12.13□□□□□ -0.47
TRIM28-207ENST00000597136 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 OR13D1Q8NGV5 346 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ENKURQ8TC29 256 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ABHD14AQ9BUJ0 271 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 FXYD6Q9H0Q3 95 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 DPAGT1Q9H3H5 408 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 J3QR06 171 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 NDUFB6O95139 128 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 UCP3P55916 312 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 MIDNQ504T8 468 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 Q6YL49 198 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 DUSP18Q8NEJ0 188 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
TRIM28-207ENST00000597136 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms