RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 UQCC2Q9BRT2 126 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
LIM2-202ENST00000596399 TOLLIPQ9H0E2 274 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
LIM2-202ENST00000596399 EFCAB10A6NFE3 127 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 TRIM64CA6NLI5 447 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 WNT4P56705 351 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 LINC00205P59089 165 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 TAS2R43P59537 309 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 CASC10Q5T4H9 136 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 TTC23Q5W5X9 447 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 ZNF554Q86TJ5 538 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 LRRTM1Q86UE6 522 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 NKAIN3Q8N8D7 197 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 MS4A10Q96PG2 267 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 NEDD4LQ96PU5 975 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 PSORS1C1Q9UIG5 152 aa12.41□□□□□ -0.42
LIM2-202ENST00000596399 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 LINC01619G3V211 115 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 RRHO14718 337 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 MYL12BO14950 172 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 RGS11O94810 467 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 FRMD6-AS1P0C7T7 363 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 RPS27AP62979 156 aaKnown RBP12.4□□□□□ -0.42
LIM2-202ENST00000596399 UNC119Q13432 240 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 ACSM3Q53FZ2 586 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 LY6G6FQ5SQ64 297 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 DHRSXQ8N5I4 330 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 SETD9Q8NE22 299 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 BPIFB6Q8NFQ5 453 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 MUC7Q8TAX7 377 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 ABHD5Q8WTS1 349 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 HDHD3Q9BSH5 251 aaPredicted RBP12.4□□□□□ -0.42
LIM2-202ENST00000596399 CST11Q9H112 138 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 NUBP2Q9Y5Y2 271 aa12.4□□□□□ -0.42
LIM2-202ENST00000596399 H0YJW9 148 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 NAPSAO96009 420 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 CD1AP06126 327 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
LIM2-202ENST00000596399 GP9P14770 177 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 PLGLAQ15195 96 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 DRAXINQ8NBI3 349 aaPredicted RBP12.39□□□□□ -0.43
LIM2-202ENST00000596399 TMED9Q9BVK6 235 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
LIM2-202ENST00000596399 CNOT2Q9NZN8 540 aaKnown RBP12.39□□□□□ -0.43
LIM2-202ENST00000596399 ABRACLQ9P1F3 81 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 OR1A1Q9P1Q5 309 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 GHRLQ9UBU3 117 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 SLC23A1Q9UHI7 598 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
LIM2-202ENST00000596399 SORL1Q92673 2214 aa12.39□□□□□ -0.43
LIM2-202ENST00000596399 H7C2Y5 167 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 PROP1O75360 226 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 MAPK3P27361 379 aaPredicted RBP12.38□□□□□ -0.43
LIM2-202ENST00000596399 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
LIM2-202ENST00000596399 QRFPP83859 136 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 RBM48Q5RL73 367 aaKnown RBP12.38□□□□□ -0.43
LIM2-202ENST00000596399 ZNF660Q6AZW8 331 aaPredicted RBP12.38□□□□□ -0.43
LIM2-202ENST00000596399 ZNF880Q6PDB4 577 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 LFNGQ8NES3 379 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 PIPOXQ9P0Z9 390 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 RNF150Q9ULK6 438 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 ERGIC3Q9Y282 383 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 LRRC42Q9Y546 428 aa12.38□□□□□ -0.43
LIM2-202ENST00000596399 CSMD3Q7Z407 3707 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 RAB29O14966 203 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 SOCS1O15524 211 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 GSTP1P09211 210 aaKnown RBP12.37□□□□□ -0.43
LIM2-202ENST00000596399 PSG5Q15238 335 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 SRSF7Q16629 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIM2-202ENST00000596399 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 UNQ5815/PRO19632Q6UWF5 114 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
LIM2-202ENST00000596399 C11orf54Q9H0W9 315 aaPredicted RBP12.37□□□□□ -0.43
LIM2-202ENST00000596399 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
LIM2-202ENST00000596399 OR5H14A6NHG9 310 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 TMEM14DPA8MWL7 114 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 UBBP0CG47 229 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 CEACAM6P40199 344 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 TPPP2P59282 170 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 GLT8D1Q68CQ7 371 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 PACRGLQ8N7B6 248 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 OR5AN1Q8NGI8 311 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 FBLIM1Q8WUP2 373 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms