RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 DDA1Q9BW61 102 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 RBKSQ9H477 322 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 PHOX2AO14813 284 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 WDR1O75083 606 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 FAM58AQ8N1B3 248 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 OR5A2Q8NGI9 324 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 POM121L2Q96KW2 1035 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 HIST1H2AAQ96QV6 131 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 OR4C12Q96R67 309 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 IGKV3D-15A0A087WSY6 115 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 SPAARA0A1B0GVQ0 90 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 SIRPB1O00241 398 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 RPS16P62249 146 aaKnown RBP12.95□□□□□ -0.34
ZNF541-205ENST00000595558 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 DPPA3Q6W0C5 159 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 NECAP1Q8NC96 275 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 KCNS2Q9ULS6 477 aa12.95□□□□□ -0.34
ZNF541-205ENST00000595558 SS18L1O75177 396 aaPredicted RBP12.94□□□□□ -0.34
ZNF541-205ENST00000595558 SP1P08047 785 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 PRO1933Q9H354 126 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 SPRR3Q9UBC9 169 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 CLDN34H7C241 214 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 CYB5R3P00387 301 aaPredicted RBP12.94□□□□□ -0.34
ZNF541-205ENST00000595558 MDH2P40926 338 aaKnown RBP12.94□□□□□ -0.34
ZNF541-205ENST00000595558 CLN3Q13286 438 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 C1orf87Q8N0U7 546 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 OR10G4Q8NGN3 311 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 APH1AQ96BI3 265 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
ZNF541-205ENST00000595558 RBM7Q9Y580 266 aaKnown RBP12.94□□□□□ -0.34
ZNF541-205ENST00000595558 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
ZNF541-205ENST00000595558 UBE2L5PA0A1B0GUS4 154 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 DEGS1O15121 323 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 SYNGR4O95473 234 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
ZNF541-205ENST00000595558 RND2P52198 227 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 ZNF600Q6ZNG1 722 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 LILRB2Q8N423 598 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 GATAD1Q8WUU5 269 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 CABLES2Q9BTV7 478 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 MRPS18CQ9Y3D5 142 aaKnown RBP12.93□□□□□ -0.34
ZNF541-205ENST00000595558 TFF1P04155 84 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 DEFA4P12838 97 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 HIST1H1BP16401 226 aaKnown RBP12.93□□□□□ -0.34
ZNF541-205ENST00000595558 LRRC75BQ2VPJ9 315 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 Q6P435 159 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 RPP25LQ8N5L8 163 aaKnown RBP12.93□□□□□ -0.34
ZNF541-205ENST00000595558 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
ZNF541-205ENST00000595558 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 IL18BPO95998 194 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 CCL11P51671 97 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 CD81P60033 236 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 WDR86Q86TI4 376 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 S100PBPQ96BU1 408 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 B4GALT7Q9UBV7 327 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 RNF150Q9ULK6 438 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 RAMP3O60896 148 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 S100GP29377 79 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 RTP5Q14D33 572 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ADIRFQ15847 76 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 HIST1H2BLQ99880 126 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ACACAQ13085 2346 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ZZEF1O43149 2961 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ANKRD30BLA7E2S9 258 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 B4DEV8 164 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 PTBP3O95758 552 aaKnown RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 CEBPDP49716 269 aaPredicted RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ARG2P78540 354 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 DEFA6Q01524 100 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 ALKBH2Q6NS38 261 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 C14orf144Q96I85 54 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 GPR87Q9BY21 358 aa12.92□□□□□ -0.34
ZNF541-205ENST00000595558 RIMS4Q9H426 269 aaPredicted RBP12.92□□□□□ -0.34
ZNF541-205ENST00000595558 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 TRBV6-6A0A0A6YYG2 114 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
ZNF541-205ENST00000595558 ZNF737O75373 536 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 SLC25A6P12236 298 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 GNG3P63215 75 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 ACSM6Q6P461 480 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 MCEMP1Q8IX19 187 aa12.91□□□□□ -0.34
ZNF541-205ENST00000595558 DEFB124Q8NES8 71 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms