RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 SRSF7Q16629 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDE4C-208ENST00000595343 ECSCRQ19T08 205 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 CLVS1Q8IUQ0 354 aaPredicted RBP14.36□□□□□ -0.11
PDE4C-208ENST00000595343 OR52L2PQ8NGH6 319 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 CASTOR1Q8WTX7 329 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 ACOT13Q9NPJ3 140 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 ERGIC3Q9Y282 383 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 FBXO7Q9Y3I1 522 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 PEX16Q9Y5Y5 336 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 DNAH1Q9P2D7 4330 aa14.36□□□□□ -0.11
PDE4C-208ENST00000595343 STARD9Q9P2P6 4700 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 A0A1W2PN81 502 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 CA11O75493 328 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 NDUFA3O95167 84 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 CHRNA7P36544 502 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 PPP1CCP36873 323 aaKnown RBP14.35□□□□□ -0.11
PDE4C-208ENST00000595343 CRIP2P52943 208 aaPredicted RBP14.35□□□□□ -0.11
PDE4C-208ENST00000595343 NDPQ00604 133 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 IRF3Q14653 427 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 OR2G6Q5TZ20 316 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 GLIPR1L1Q6UWM5 242 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 C5orf24Q7Z6I8 188 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 OR13C5Q8NGS8 318 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 RAB2BQ8WUD1 216 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 MRPS24Q96EL2 167 aaKnown RBP14.35□□□□□ -0.11
PDE4C-208ENST00000595343 CYYR1Q96J86 154 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 CST11Q9H112 138 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 MBNL3Q9NUK0 354 aaKnown RBP14.35□□□□□ -0.11
PDE4C-208ENST00000595343 KIAA1456Q9P272 454 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 JPT1Q9UK76 154 aa14.35□□□□□ -0.11
PDE4C-208ENST00000595343 FOXA2Q9Y261 457 aaPredicted RBP14.35□□□□□ -0.11
PDE4C-208ENST00000595343 LDLRAD4O15165 306 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 OGG1O15527 345 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 GPX5O75715 221 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 OR3A3P47888 321 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 ETV1P50549 477 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 ZNF833PQ6ZTB9 187 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 SMIM19Q96E16 107 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 OR4C12Q96R67 309 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 BANF2Q9H503 90 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 EDA2RQ9HAV5 297 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 FGF20Q9NP95 211 aaPredicted RBP14.34□□□□□ -0.11
PDE4C-208ENST00000595343 KCNIP1Q9NZI2 227 aa14.34□□□□□ -0.11
PDE4C-208ENST00000595343 TRAV8-7A0A075B6U6 113 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 TRBV5-5A0A0J9YX44 114 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 UBE2QL1A1L167 161 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 IGHV4-30-4P0DP06 118 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 FUT3P21217 361 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 CX3CL1P78423 397 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 PITPNAQ00169 270 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 ST3GAL4Q11206 333 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.12
PDE4C-208ENST00000595343 TMPRSS11AQ6ZMR5 421 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 ZNF554Q86TJ5 538 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 ANKRD13BQ86YJ7 626 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 Q8N1Y9 231 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 JAGN1Q8N5M9 183 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 TCTEX1D1Q8N7M0 179 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 SELENOIQ9C0D9 397 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 CKLFQ9UBR5 152 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 A3GALT2U3KPV4 340 aa14.33□□□□□ -0.12
PDE4C-208ENST00000595343 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 FAM90A7PA6NKC0 464 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 FAM90A23PA8MXZ1 464 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 YPEL1O60688 119 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 IGHV3-11P01762 117 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 MAS1P04201 325 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 HSPB1P04792 205 aaKnown RBP14.32□□□□□ -0.12
PDE4C-208ENST00000595343 GLAP06280 429 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
PDE4C-208ENST00000595343 HTD2P86397 168 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 LY6G6FQ5SQ64 297 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 GPR107Q5VW38 600 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 SIGIRRQ6IA17 410 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 ZNF367Q7RTV3 350 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 HAPLN4Q86UW8 402 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 MRPL30Q8TCC3 161 aaKnown RBP14.32□□□□□ -0.12
PDE4C-208ENST00000595343 GHSRQ92847 366 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 FLYWCH2Q96CP2 140 aaKnown RBP14.32□□□□□ -0.12
PDE4C-208ENST00000595343 YPEL2Q96QA6 119 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 C19orf73Q9NVV2 129 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 BABAM2Q9NXR7 383 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 NUBP2Q9Y5Y2 271 aa14.32□□□□□ -0.12
PDE4C-208ENST00000595343 RGS11O94810 467 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 LALBAP00709 142 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 EGR2P11161 476 aaPredicted RBP14.31□□□□□ -0.12
PDE4C-208ENST00000595343 MGMTP16455 207 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 FSTP19883 344 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 RPS11P62280 158 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDE4C-208ENST00000595343 Q499Y3 187 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 FAM131AQ6UXB0 335 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 ADAMTSL5Q6ZMM2 481 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 LYPD6Q86Y78 171 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 YIPF6Q96EC8 236 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 TMEM80Q96HE8 168 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 Q96M66 194 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 FBXL15Q9H469 300 aa14.31□□□□□ -0.12
PDE4C-208ENST00000595343 DIMT1Q9UNQ2 313 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms