RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 MT-ND4LP03901 98 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 TNFRSF1AP19438 455 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
SPHK1-207ENST00000590959 PIGPP57054 158 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 TMEM187Q14656 261 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 LIAT1Q6ZQX7 453 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 FAM185AQ8N0U4 392 aa16.29■□□□□ 0.2
SPHK1-207ENST00000590959 LHBP01229 141 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 EGR1P18146 543 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 RCC1P18754 421 aaPredicted RBP16.28■□□□□ 0.2
SPHK1-207ENST00000590959 SNCAP37840 140 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 EFNB3Q15768 340 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 ZNF561Q8N587 486 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 ABHD14BQ96IU4 210 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 CISD1Q9NZ45 108 aaKnown RBP16.28■□□□□ 0.2
SPHK1-207ENST00000590959 RNF7Q9UBF6 113 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 TMED3Q9Y3Q3 217 aa16.28■□□□□ 0.2
SPHK1-207ENST00000590959 LSM5Q9Y4Y9 91 aaKnown RBP16.28■□□□□ 0.2
SPHK1-207ENST00000590959 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.27■□□□□ 0.2
SPHK1-207ENST00000590959 PSPNO60542 156 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 GLP1RP43220 463 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 CCL8P80075 99 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 TESK1Q15569 626 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 ZNF497Q6ZNH5 498 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 C20orf204Q6ZNR8 217 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 OR11L1Q8NGX0 322 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 Q8TCH9 128 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 WIPI2Q9Y4P8 454 aa16.27■□□□□ 0.2
SPHK1-207ENST00000590959 USP9YO00507 2555 aaPredicted RBP16.27■□□□□ 0.19
SPHK1-207ENST00000590959 DEFB108AA8MXU0 73 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 TRDCB7Z8K6 153 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 F12P00748 615 aaPredicted RBP16.27■□□□□ 0.19
SPHK1-207ENST00000590959 PLAUP00749 431 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 SMIM6P0DI80 62 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 RHEBQ15382 184 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 ZNF880Q6PDB4 577 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 MOB1BQ7L9L4 216 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 FOXRED2Q8IWF2 684 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 GAPTQ8N292 157 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 PLPPR1Q8TBJ4 325 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 RTN4IP1Q8WWV3 396 aaPredicted RBP16.27■□□□□ 0.19
SPHK1-207ENST00000590959 C18orf12Q96KH6 178 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 MS4A5Q9H3V2 200 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 DYNLRB1Q9NP97 96 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 PPP1R3CQ9UQK1 317 aa16.27■□□□□ 0.19
SPHK1-207ENST00000590959 PIGBOS1A0A0B4J2F0 54 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 PCP4L1A6NKN8 68 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 B9A039 149 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 ST8SIA3O43173 380 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 PSG2P11465 335 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 KCNJ3P48549 501 aa16.26■□□□□ 0.19
SPHK1-207ENST00000590959 SEBOXQ9HB31 216 aaPredicted RBP16.26■□□□□ 0.19
SPHK1-207ENST00000590959 LRBAP50851 2863 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 MBPP02686 304 aaPredicted RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 CTXN2P0C2S0 81 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 IRF2P14316 349 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 NFYBP25208 207 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 PRDX2P32119 198 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 CAMLGP49069 296 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 COL10A1Q03692 680 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 GUK1Q16774 197 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 ZNF672Q499Z4 452 aaPredicted RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 FAM219AQ8IW50 185 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 MOB3AQ96BX8 217 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 TMEM204Q9BSN7 226 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 TRAPPC2LQ9UL33 140 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 HRNRQ86YZ3 2850 aaPredicted RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 CDS2O95674 445 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 S100A9P06702 114 aaKnown RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 SCTP09683 121 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 LOXP28300 417 aaPredicted RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 IGSF11Q5DX21 431 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 ZCCHC24Q8N2G6 241 aaKnown RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 CD177Q8N6Q3 437 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 SPIN2AQ99865 258 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 SPIN2BQ9BPZ2 258 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 LIME1Q9H400 295 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 UNKLQ9H9P5 680 aaKnown RBP16.25■□□□□ 0.19
SPHK1-207ENST00000590959 SAP30LQ9HAJ7 183 aa16.25■□□□□ 0.19
SPHK1-207ENST00000590959 CHD3Q12873 2000 aaKnown RBP16.24■□□□□ 0.19
SPHK1-207ENST00000590959 BTBD17A6NE02 478 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 SCGB1D2O95969 90 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 TK1P04183 234 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 OR5AC1P0C628 307 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 OR8U9P0C7N5 309 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 GNMTQ14749 295 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 MIDNQ504T8 468 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 MEX3BQ6ZN04 569 aaKnown RBP16.24■□□□□ 0.19
SPHK1-207ENST00000590959 OR8U1Q8NH10 309 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 LILRB1Q8NHL6 650 aaPredicted RBP16.24■□□□□ 0.19
SPHK1-207ENST00000590959 AKR1E2Q96JD6 320 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 C19orf12Q9NSK7 152 aa16.24■□□□□ 0.19
SPHK1-207ENST00000590959 IGKV1D-17A0A075B6S4 117 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 DUXBA0A1W2PPF3 345 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 TMEM30CPA0ZSE6 113 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 LRRC30A6NM36 301 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 S100A6P06703 90 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 HLA-DRB3P79483 266 aa16.23■□□□□ 0.19
SPHK1-207ENST00000590959 HABP2Q14520 560 aaPredicted RBP16.23■□□□□ 0.19
SPHK1-207ENST00000590959 ZNF266Q14584 549 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms