RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 UPRTQ96BW1 309 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF486Q96H40 463 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-211ENST00000590239 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 C7orf69Q9H7B7 122 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 GPR132Q9UNW8 380 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 GAB2Q9UQC2 676 aa12.37□□□□□ -0.43
DDX39A-211ENST00000590239 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
DDX39A-211ENST00000590239 SLC31A2O15432 143 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 IGLV1-47P01700 117 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 CTSDP07339 412 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-211ENST00000590239 COX7A1P24310 79 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 GNRHRP30968 328 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 FAHD2BQ6P2I3 314 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-211ENST00000590239 SPNS3Q6ZMD2 512 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-211ENST00000590239 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 FAHD2AQ96GK7 314 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 NUDT15Q9NV35 164 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF221Q9UK13 617 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 VSIG4Q9Y279 399 aa12.36□□□□□ -0.43
DDX39A-211ENST00000590239 FLNAP21333 2647 aaKnown RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 RNASEK-C17orf49H0YIS7 233 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 RAB29O14966 203 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 SPNP16150 400 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 HOXB4P17483 251 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 GPR12P47775 334 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 UBE2E1P51965 193 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF137PP52743 207 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 RAG2P55895 527 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 DLX1P56177 255 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 CCBE1Q6UXH8 406 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 ZNF645Q8N7E2 425 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 OR10X1Q8NGY0 326 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 MARVELD1Q9BSK0 173 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 OR2D2Q9H210 308 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 MMP28Q9H239 520 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 PIPOXQ9P0Z9 390 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 RNF150Q9ULK6 438 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 KCNS2Q9ULS6 477 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 AMMECR1Q9Y4X0 333 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-211ENST00000590239 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
DDX39A-211ENST00000590239 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 HIVEP1P15822 2718 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 GPR31O00270 319 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
DDX39A-211ENST00000590239 RLN1P04808 185 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 IL3RAP26951 378 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 S100GP29377 79 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
DDX39A-211ENST00000590239 RND3P61587 244 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 BAMBIQ13145 260 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 KLRD1Q13241 179 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ABCA11PQ4W5N1 156 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 LYG1Q8N1E2 194 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 DRAM1Q8N682 238 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 BVESQ8NE79 360 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 LHX4Q969G2 390 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ABHD14BQ96IU4 210 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ALX4Q9H161 411 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-211ENST00000590239 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 ZANQ9Y493 2812 aa12.34□□□□□ -0.43
DDX39A-211ENST00000590239 TRAV6A0A075B6T7 132 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 HSD17B6O14756 317 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 PEX14O75381 377 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 IGLV2-14P01704 120 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 ARG1P05089 322 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 TAS2R31P59538 309 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 UBE2MP61081 183 aaKnown RBP12.33□□□□□ -0.44
DDX39A-211ENST00000590239 PRB3Q04118 309 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-211ENST00000590239 MIDNQ504T8 468 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 FAM71F2Q6NXP2 309 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 ZNF818PQ6ZRF7 136 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 S1PR3Q99500 378 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 SDHAF2Q9NX18 166 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 ZNRD1Q9P1U0 126 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
DDX39A-211ENST00000590239 VPS13CQ709C8 3753 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms