RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 MOB3AQ96BX8 217 aa17.33■□□□□ 0.37
R3HDM4-204ENST00000589428 C20orf85Q9H1P6 137 aa17.33■□□□□ 0.37
R3HDM4-204ENST00000589428 HEXA-AS1Q9H8Q6 139 aa17.33■□□□□ 0.37
R3HDM4-204ENST00000589428 RNASEK-C17orf49H0YIS7 233 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 FXYD4P59646 89 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 RUSC1-AS1Q66K80 236 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 PLET1Q6UQ28 207 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 MARCH1Q8TCQ1 289 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 SLC25A21Q9BQT8 299 aaPredicted RBP17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 TOLLIPQ9H0E2 274 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 GFOD1Q9NXC2 390 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 FLVCR2Q9UPI3 526 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 OR2W1Q9Y3N9 320 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 JMJD1CQ15652 2540 aa17.33■□□□□ 0.36
R3HDM4-204ENST00000589428 IGKV1D-13A0A0B4J2D9 117 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 IGHV1-8P0DP01 117 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 IGKV1-13P0DP09 117 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 NFYBP25208 207 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 HERV-K104P61576 105 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 TMEM30BQ3MIR4 351 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 C9orf139Q6ZV77 190 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 LDLRAD3Q86YD5 345 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 OR10A7Q8NGE5 316 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 OR52M1Q8NGK5 317 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 ZNF418Q8TF45 676 aaPredicted RBP17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 NUBP2Q9Y5Y2 271 aa17.32■□□□□ 0.36
R3HDM4-204ENST00000589428 TRAV6A0A075B6T7 132 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 FAM172BPA6NC97 362 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 UBE2E1P51965 193 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 BAMBIQ13145 260 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 LEAP2Q969E1 77 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 TOMM40LQ969M1 308 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 SUCNR1Q9BXA5 334 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 VSIG4Q9Y279 399 aa17.31■□□□□ 0.36
R3HDM4-204ENST00000589428 ARPC1BO15143 372 aaKnown RBP17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 IGHV3-7P01780 117 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 COX7A1P24310 79 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 MORN2Q502X0 79 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 OR13D1Q8NGV5 346 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 CREB3L1Q96BA8 519 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 MARVELD1Q9BSK0 173 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 SESN1Q9Y6P5 492 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 YPEL1O60688 119 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 RBMS3Q6XE24 437 aaKnown RBP17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 BCL6BQ8N143 479 aaPredicted RBP17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 YPEL2Q96QA6 119 aa17.3■□□□□ 0.36
R3HDM4-204ENST00000589428 A0A1W2PRD5 423 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 A0A1W2PRF3 423 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 A0A1W2PRM7 423 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 RAB25P57735 213 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 SURF2Q15527 256 aaPredicted RBP17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 PNKDQ8N490 385 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 ZDHHC22Q8N966 263 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 CUBNO60494 3623 aa17.29■□□□□ 0.36
R3HDM4-204ENST00000589428 NPFFO15130 113 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 TCF21O43680 179 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 PI3P19957 117 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 ECI1P42126 302 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 HCP5Q6MZN7 132 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 PRIMA1Q86XR5 153 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 ZNF439Q8NDP4 499 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 SECTM1Q8WVN6 248 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 GPR132Q9UNW8 380 aa17.28■□□□□ 0.36
R3HDM4-204ENST00000589428 RGS11O94810 467 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 RLN1P04808 185 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 H2AFB2P0C5Z0 115 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 OR8U9P0C7N5 309 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 PGAM2P15259 253 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 LUMP51884 338 aaPredicted RBP17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 ZNF134P52741 427 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 UCP3P55916 312 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 OR2AK2Q8NG84 335 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 OR8U1Q8NH10 309 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 TMEM133Q9H2Q1 129 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 C5orf66Q9H5L9 145 aa17.27■□□□□ 0.36
R3HDM4-204ENST00000589428 A0A087X0M5 115 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 A0A1B0GX30 115 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 INMT-MINDY4F8WBC2 141 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 SLC31A2O15432 143 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 ST8SIA5O15466 376 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 LY6G6FQ5SQ64 297 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 Q6ZNX1 250 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 TMED4Q7Z7H5 227 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 SIGLECL1Q8N7X8 197 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 EDARADDQ8WWZ3 215 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 AGMATQ9BSE5 352 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 RTBDNQ9BSG5 229 aaPredicted RBP17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 SLC5A7Q9GZV3 580 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 PSG11Q9UQ72 335 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 FAM96BQ9Y3D0 163 aa17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 SOX21Q9Y651 276 aaPredicted RBP17.27■□□□□ 0.35
R3HDM4-204ENST00000589428 A0A1W2PPE3 182 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 PEX14O75381 377 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 ANXA7P20073 488 aaKnown RBP17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 GNRHRP30968 328 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 SAA4P35542 130 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 GNG10P50151 68 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 MIDNQ504T8 468 aa17.26■□□□□ 0.35
R3HDM4-204ENST00000589428 CT45A1Q5HYN5 189 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms