RNA–Protein interactions for RNA: ENST00000589222.5

BCAS3-222, Transcript of BCAS3, microtubule associated cell migration factor, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-222	ENST00000589222	SEC11B	P0C7V7	166 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	SELENOV	P59797	346 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	ERVFRD-1	P60508	538 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	CCL8	P80075	99 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	RPRML	Q8N4K4	120 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	S100PBP	Q96BU1	408 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	GALNT14	Q96FL9	552 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	SMIM8	Q96KF7	97 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	OR4C12	Q96R67	309 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	DDA1	Q9BW61	102 aa		10.35	□□□□□ -0.75
BCAS3-222	ENST00000589222	FAM208B	Q5VWN6	2430 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222		A0A1W2PPV4	95 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	AQP7	O14520	342 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	SPINT2	O43291	252 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	S1PR2	O95136	353 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	CDS2	O95674	445 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	IGHV3-48	P01763	117 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	S100P	P25815	95 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	CATR1	Q13166	79 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	WDR25	Q64LD2	544 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	BTNL8	Q6UX41	500 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	SSMEM1	Q8WWF3	244 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	BCL2L2	Q92843	193 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	RAB39B	Q96DA2	213 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	C18orf12	Q96KH6	178 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	RNF122	Q9H9V4	155 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	MALRD1	Q5VYJ5	2156 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	TMEM30CP	A0ZSE6	113 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	LINC01387	J3KSC0	135 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	ZADH2	Q8N4Q0	377 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	OR4A16	Q8NH70	328 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	SSC4D	Q8WTU2	575 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	RND1	Q92730	232 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	SARAF	Q96BY9	339 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	TUBD1	Q9UJT1	453 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	ZG16	O60844	167 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	PRB4	P10163	310 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	REG1B	P48304	166 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	MSMO1	Q15800	293 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	TMEM42	Q69YG0	159 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	EIF4E3	Q8N5X7	224 aa	Known RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	TECTB	Q96PL2	329 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	SMIM7	Q9BQ49	75 aa		10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	LIN7C	Q9NUP9	197 aa	Known RBP	10.34	□□□□□ -0.75
BCAS3-222	ENST00000589222	ZNF98	A6NK75	572 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	DFFB	O76075	338 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	TNFSF10	P50591	281 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	LYG1	Q8N1E2	194 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	OR10P1	Q8NGE3	313 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	STRAP	Q9Y3F4	350 aa	Known RBP	10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	MAP1LC3B2	A6NCE7	125 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	C17orf98	A8MV24	154 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	C12orf77	C9JDV5	145 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	SMPD2	O60906	423 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	IGLV3-1	P01715	115 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	WT1	P19544	449 aa	Predicted RBP	10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	HOXA1	P49639	335 aa	Predicted RBP	10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	MAP1LC3B	Q9GZQ8	125 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	ENY2	Q9NPA8	101 aa		10.33	□□□□□ -0.76
BCAS3-222	ENST00000589222	TRAV17	A0A0B4J275	112 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222		A0A1W2PPQ1	181 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	SPINK4	O60575	86 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	GAPDH	P04406	335 aa	Known RBP	10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	CECR9	P0C854	216 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	ERVK-16	P61578	105 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	HIST1H2BA	Q96A08	127 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	ATP5S	Q99766	215 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	LYRM2	Q9NU23	88 aa	Predicted RBP	10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	CHRNA7	P36544	502 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	FFAR4	Q5NUL3	377 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	RIMS4	Q9H426	269 aa	Predicted RBP	10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	PTBP3	O95758	552 aa	Known RBP	10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	RAB5A	P20339	215 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	HOXA6	P31267	233 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	CD200	P41217	278 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	RPL39P5	Q59GN2	51 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	FOXL2NB	Q6ZUU3	175 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	OR13A1	Q8NGR1	328 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	IFT22	Q9H7X7	185 aa		10.32	□□□□□ -0.76
BCAS3-222	ENST00000589222	SST	P61278	116 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	SRSF4	Q08170	494 aa	Known RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	WDR86	Q86TI4	376 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	CISD2	Q8N5K1	135 aa	Known RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	TVP23C	Q96ET8	276 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	OR51I2	Q9H344	312 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	TRBV23-1	A0A0A0MS06	115 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	SLC25A6	P12236	298 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	FAM27E3	Q08E93	113 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	SNIP1	Q8TAD8	396 aa	Known RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	GATAD1	Q8WUU5	269 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	CCL17	Q92583	94 aa		10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	ENSA	O43768	121 aa	Known RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	HSPB1	P04792	205 aa	Known RBP	10.31	□□□□□ -0.76
BCAS3-222	ENST00000589222	ARL16	Q0P5N6	197 aa		10.31	□□□□□ -0.76

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