RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 OR2H2O95918 312 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 PSG2P11465 335 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 FHITP49789 147 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 FOXG1P55316 489 aaPredicted RBP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 PAX9P55771 341 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 BATF2Q8N1L9 274 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 SCCPDHQ8NBX0 429 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 TMEM171Q8WVE6 324 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 IL1F10Q8WWZ1 152 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 NINJ1Q92982 152 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 GALMQ96C23 342 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 OBP2BQ9NPH6 170 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 PUS1Q9Y606 427 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 ARHGAP21Q5T5U3 1957 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 C2CD3Q4AC94 2353 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 BSNQ9UPA5 3926 aa11.88□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 H3BQ15 152 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 SMPD2O60906 423 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 CBR1P16152 277 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 EPHA1P21709 976 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF154Q13106 437 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF645Q8N7E2 425 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 CLDND2Q8NHS1 167 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 DEFB127Q9H1M4 99 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
NEDD4L-223ENST00000588516 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 IFNL4K9M1U5 179 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 AP4M1O00189 453 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 SIRPB1O00241 398 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 GPR37O15354 613 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 TNFSF12O43508 249 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 IL2RGP31785 369 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 CEACAM6P40199 344 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 TESK1Q15569 626 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 LRRC75BQ2VPJ9 315 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 TMEM41BQ5BJD5 291 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 Q6ZT83 130 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 WDR31Q8NA23 367 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 OR13D1Q8NGV5 346 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 TAAR6Q96RI8 345 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 SEBOXQ9HB31 216 aaPredicted RBP11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 RAB9BQ9NP90 201 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 CRIM1Q9NZV1 1036 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 A0A1W2PPH5 198 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 AGFG2O95081 481 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 TMEM50AO95807 157 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 HAND1O96004 215 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 IGHG3P01860 377 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 ICAM4Q14773 271 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF66Q6ZN08 573 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 MRGPRGQ86SM5 289 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 C17orf78Q8N4C9 275 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 C2CD4CQ8TF44 421 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF488Q96MN9 340 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 BCL2L14Q9BZR8 327 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 HES4Q9HCC6 221 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
NEDD4L-223ENST00000588516 A6NLC8 198 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 RHBDL1O75783 438 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 WT1P19544 449 aaPredicted RBP11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 ASCL1P50553 236 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 RPP30P78346 268 aaKnown RBP11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 HAGHQ16775 308 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 FAM24BQ8N5W8 94 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 PPP1R35Q8TAP8 253 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 RAB39BQ96DA2 213 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 RARRES2Q99969 163 aa11.85□□□□□ -0.51
NEDD4L-223ENST00000588516 OR2J1Q9GZK6 312 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms