RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 ACBD6Q9BR61 282 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 GINS4Q9BRT9 223 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM175Q9BSA9 504 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 COPS4Q9BT78 406 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM243Q9BU79 118 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 CDCA4Q9BXL8 241 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SAMD10Q9BYL1 202 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NKX6-2Q9C056 277 aaPredicted RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 OR51V1Q9H2C8 321 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 MIXL1Q9H2W2 232 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM138Q9NPI0 162 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 RBM22Q9NW64 420 aaKnown RBP eCLIP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 DDIT4Q9NX09 232 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 MYEF2Q9P2K5 600 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 TBC1D24Q9ULP9 559 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SSR3Q9UNL2 185 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SAMHD1Q9Y3Z3 626 aaKnown RBP1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NUBP2Q9Y5Y2 271 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 SCN1AP35498 2009 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 NUP205Q92621 2012 aa1.89□□□□□ -2.11
RPRD1A-203ENST00000585879 DOCK3Q8IZD9 2030 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 IGHV3-72A0A0B4J1Y9 119 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TMEM210A6NLX4 147 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 C1orf196B1AJZ1 125 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 DISC1C4P0D8 188 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 D6RAR5 112 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 NDUFS8O00217 210 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 UPK1AO00322 258 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 FABP7O15540 132 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 CHP2O43745 196 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 MFSD11O43934 449 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 GLSO94925 669 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR2F2O95006 317 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 FADS2O95864 444 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 CYB5R3P00387 301 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 HBE1P02100 147 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 LINC00614P0C842 121 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 ANXA8P13928 327 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SPNP16150 400 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 GADD45AP24522 165 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SLC6A1P30531 599 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 AGTR1P30556 359 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 S100A11P31949 105 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OTX1P32242 354 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 RPL35P42766 123 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 RAB9AP51151 201 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 CDC42P60953 191 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 LSM3P62310 102 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SKP1P63208 163 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 DCDP81605 110 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SIGLEC14Q08ET2 396 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 MLLT11Q13015 90 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 MAD2L1BPQ15013 274 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 PAFAH1B3Q15102 231 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 ATP6AP1LQ52LC2 224 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SPIN4Q56A73 249 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 PYDC2Q56P42 97 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 Q5BKY6 102 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 CLLU1OSQ5K130 101 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SAPCD1Q5SSQ6 148 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 IDNKQ5T6J7 187 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 NXNL2Q5VZ03 156 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 PTRHD1Q6GMV3 140 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 LAMTOR1Q6IAA8 161 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 EIF5AL1Q6IS14 154 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 HAGHLQ6PII5 290 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SPESP1Q6UW49 350 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TPGS1Q6ZTW0 290 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 FAM122BQ7Z309 247 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 DCXRQ7Z4W1 244 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TMCO2Q7Z6W1 182 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SCD5Q86SK9 330 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TAC4Q86UU9 113 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 LRRC28Q86X40 367 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SNX29P2Q8IUI4 249 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 Q8N402 240 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR4M2Q8NGB6 313 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR4M1Q8NGD0 313 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR5M1Q8NGP8 315 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR5J2Q8NH18 312 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 OR10G6Q8NH81 332 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 GHSRQ92847 366 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 SMARCD1Q96GM5 515 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 DIRAS2Q96HU8 199 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 KCNS1Q96KK3 526 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 KCTD7Q96MP8 289 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TSNAXQ99598 290 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 MGLLQ99685 303 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 REG4Q9BYZ8 158 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 METTL9Q9H1A3 318 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 WDR55Q9H6Y2 383 aaPredicted RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 GEMIN7Q9H840 131 aaKnown RBP1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 TUBA4BQ9H853 241 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 REEP1Q9H902 201 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 RNF122Q9H9V4 155 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 POPDC3Q9HBV1 291 aa1.88□□□□□ -2.11
RPRD1A-203ENST00000585879 CSNK1G1Q9HCP0 422 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms