RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 AJUBAQ96IF1 538 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 RNF5Q99942 180 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 C7orf50Q9BRJ6 194 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 WDR12Q9GZL7 423 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 ABCB10Q9NRK6 738 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 KLK11Q9UBX7 282 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 RBM7Q9Y580 266 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 FN1P02751 2386 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 IGKV1D-8A0A087WSZ0 117 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 IGHV3-43A0A0B4J1X8 118 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 A0A0U1RQK1 487 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 MEX3AA1L020 520 aaKnown RBP7.54□□□□□ -1.2
UBBP4-201ENST00000583708 NAP1L6A6NFF2 107 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 DISC1C4P0D8 188 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 TCF21O43680 179 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 RAB3DO95716 219 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 FCER2P06734 321 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 FAM106CPP0CH98 169 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 IGHV3-43DP0DP04 118 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 RRASP10301 218 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 CD1BP29016 333 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 FCGR2CP31995 323 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 GPR12P47775 334 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF134P52741 427 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 HILS1P60008 231 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 HERV-K104P61576 105 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 TSPAN5P62079 268 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 DGCR2P98153 550 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF846Q147U1 533 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 SURF2Q15527 256 aaPredicted RBP7.54□□□□□ -1.2
UBBP4-201ENST00000583708 LRRC75BQ2VPJ9 315 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 STEAP1BQ6NZ63 245 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 BRD3OSQ6XYD6 125 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF833PQ6ZTB9 187 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 TGIF2LXQ8IUE1 241 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 OR8H1Q8NGG4 311 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 OR10V1Q8NGI7 309 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 MAFIPQ8WZ33 124 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 TOMM40LQ969M1 308 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF486Q96H40 463 aaPredicted RBP7.54□□□□□ -1.2
UBBP4-201ENST00000583708 PRRT1Q99946 306 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 SRRQ9GZT4 340 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 SLC2A8Q9NY64 477 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 EHFQ9NZC4 300 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 ZNRD1Q9P1U0 126 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 SCP2D1Q9UJQ7 156 aa7.54□□□□□ -1.2
UBBP4-201ENST00000583708 FAM172BPA6NC97 362 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 CENPXA8MT69 81 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 M0QZK8 103 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 HSD17B6O14756 317 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 B3GALNT1O75752 331 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 PPYP01298 95 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 OR8U9P0C7N5 309 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 PTHLHP12272 177 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 HLA-DMAP28067 261 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 HRH1P35367 487 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 IER3P46695 156 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 INPP1P49441 399 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 GNG10P50151 68 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 EBI3Q14213 229 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 GNMTQ14749 295 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF79Q15937 498 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 SSX2Q16385 188 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 TRIQKQ629K1 86 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF660Q6AZW8 331 aaPredicted RBP7.53□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF66Q6ZN08 573 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 Q71RC1 249 aaPredicted RBP7.53□□□□□ -1.2
UBBP4-201ENST00000583708 CMTM1Q8IZ96 169 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 LYG1Q8N1E2 194 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 TOMM5Q8N4H5 51 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 OR8U1Q8NH10 309 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 ZFAND1Q8TCF1 268 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 RTN4IP1Q8WWV3 396 aaPredicted RBP7.53□□□□□ -1.2
UBBP4-201ENST00000583708 MOB3AQ96BX8 217 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 HSD17B10Q99714 261 aaKnown RBP7.53□□□□□ -1.2
UBBP4-201ENST00000583708 AIFM2Q9BRQ8 373 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 IFI27L2Q9H2X8 130 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 OCEL1Q9H607 264 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 AKIP1Q9NQ31 210 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 FAM212BQ9NTI7 297 aaPredicted RBP7.53□□□□□ -1.2
UBBP4-201ENST00000583708 OR1A1Q9P1Q5 309 aa7.53□□□□□ -1.2
UBBP4-201ENST00000583708 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
UBBP4-201ENST00000583708 IGHV3OR16-10A0A075B7F0 116 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 PIGBOS1A0A0B4J2F0 54 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 IGHV1-3A0A0C4DH29 117 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 OR5H14A6NHG9 310 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 RNF212BA8MTL3 300 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 TRIM77I1YAP6 450 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 PMP2P02689 132 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 CD3DP04234 171 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 KIR2DS2P43631 304 aa7.52□□□□□ -1.21
UBBP4-201ENST00000583708 RFX2P48378 723 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms