RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 DEFA6Q01524 100 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 EBPQ15125 230 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 C4orf26Q17RF5 130 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 SPATA31B1PQ5VZV4 182 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF767PQ75MW2 155 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 PLCZ1Q86YW0 608 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 FUNDC1Q8IVP5 155 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 ERMNQ8TAM6 284 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 PPCDCQ96CD2 204 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 CMTM5Q96DZ9 223 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 CAPZA3Q96KX2 299 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 TBX5Q99593 518 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 UPK3BQ9BT76 320 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 MROQ9BYG7 248 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 NKX6-2Q9C056 277 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 IMP3Q9NV31 184 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNHIT6Q9NWK9 470 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 MMACHCQ9Y4U1 282 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 CRB1P82279 1406 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 IGHV3-73A0A0B4J1V6 119 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 C3orf84H3BNL1 204 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 SSNA1O43805 119 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 PSMG1O95456 288 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 CPMP14384 443 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 SLC25A16P16260 332 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 MIPP30301 263 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 CA7P43166 264 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 EMP2P54851 167 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 TAS2R45P59539 299 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 SNAP25P60880 206 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 SMAGPQ0VAQ4 97 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 LCN8Q6JVE9 175 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 RASL11AQ6T310 242 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 Q8N402 240 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 TMEM251Q8N6I4 163 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 CCDC112Q8NEF3 446 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 OR2D3Q8NGH3 330 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 OR4C16Q8NGL9 310 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 OR10A6Q8NH74 314 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 OR10D3Q8NH80 312 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 FNDC9Q8TBE3 224 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 DNAJB3Q8WWF6 145 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 SMIM19Q96E16 107 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 DHRS9Q9BPW9 319 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 CACNA1DQ01668 2161 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 RIMS2Q9UQ26 1411 aa1.65□□□□□ -2.15
SMCHD1-209ENST00000583441 DHX57Q6P158 1386 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 GOLGA8KD6RF30 607 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 GOLGA8MH3BSY2 632 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 NPPCP23582 126 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 BLVRBP30043 206 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 TSPEAR-AS2P59090 65 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 MESTQ5EB52 335 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 FAM151BQ6UXP7 276 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 FAM19A5Q7Z5A7 132 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 OR11H1Q8NG94 326 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 OR5C1Q8NGR4 320 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 ASB13Q8WXK3 278 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 MS4A6EQ96DS6 147 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 UPF3BQ9BZI7 483 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 DRC3Q9H069 523 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 C11orf1Q9H5F2 150 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 PLEKHJ1Q9NW61 149 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 ATP6V1DQ9Y5K8 247 aa1.64□□□□□ -2.15
SMCHD1-209ENST00000583441 DNMT1P26358 1616 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 TINCRA0A1B0GVN0 87 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 C17orf51A8MQB3 221 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ODF3BA8MYP8 253 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 LY6LH3BQJ8 138 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 SLC17A3O00476 420 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 UBFD1O14562 309 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 AZIN1O14977 448 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 GSTZ1O43708 216 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ADAP1O75689 374 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 LY6HO94772 140 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 APOEP02649 317 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ATP5G1P05496 136 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ESDP10768 282 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 UGT2B7P16662 529 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ZNF7P17097 686 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 COILP38432 576 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 IFNGR2P38484 337 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 CD200P41217 278 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 CLDN12P56749 244 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 LINC00313P59037 77 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 HERVK_113P63121 156 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 BTN3A2P78410 334 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 HPCAP84074 193 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 FABP5Q01469 135 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 TMEM267Q0VDI3 215 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ZNF181Q2M3W8 571 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 ATP5L2Q7Z4Y8 100 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 RIBC1Q8N443 379 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 C16orf78Q8WTQ4 265 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 Q8WTZ3 238 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 TMBIM1Q969X1 311 aa1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 CPNE2Q96FN4 548 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-209ENST00000583441 KCTD7Q96MP8 289 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms