RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CA2P00918 260 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 CD7P09564 240 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 HTD2P86397 168 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 ATP6AP1Q15904 470 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 LY6G6FQ5SQ64 297 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 RAB12Q6IQ22 244 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 SYS1Q8N2H4 156 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 OR5T1Q8NG75 326 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 TRUB1Q8WWH5 349 aaKnown RBP9.63□□□□□ -0.87
SS18-219ENST00000581570 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 TMEM138Q9NPI0 162 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 IMPAD1Q9NX62 359 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
SS18-219ENST00000581570 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
SS18-219ENST00000581570 SLC23A1Q9UHI7 598 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 EXOGQ9Y2C4 368 aaKnown RBP9.63□□□□□ -0.87
SS18-219ENST00000581570 PEX16Q9Y5Y5 336 aa9.63□□□□□ -0.87
SS18-219ENST00000581570 OR11H12B2RN74 326 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 H7C2Y5 167 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 CA11O75493 328 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 RBBP9O75884 186 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 MAS1P04201 325 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 CD2P06729 351 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
SS18-219ENST00000581570 BDKRB2P30411 391 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 MC5RP33032 325 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GBX2P52951 348 aaPredicted RBP9.62□□□□□ -0.87
SS18-219ENST00000581570 PPP3R1P63098 170 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GNGT1P63211 74 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
SS18-219ENST00000581570 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GPR176Q14439 515 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 RPEL1Q2QD12 228 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 FAM71F2Q6NXP2 309 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GLDNQ6ZMI3 551 aaPredicted RBP9.62□□□□□ -0.87
SS18-219ENST00000581570 LAX1Q8IWV1 398 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 OR2AK2Q8NG84 335 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GRPEL2Q8TAA5 225 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 RNF5Q99942 180 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
SS18-219ENST00000581570 PIPOXQ9P0Z9 390 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 POMPQ9Y244 141 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 GMPPBQ9Y5P6 360 aa9.62□□□□□ -0.87
SS18-219ENST00000581570 UBE2QL1A1L167 161 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 OR5H14A6NHG9 310 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 H0YJW9 148 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 SLC22A1O15245 554 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 SC5DO75845 299 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 AADACP22760 399 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 ALDH3A2P51648 485 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 FXYD3Q14802 87 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 PSG5Q15238 335 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 CD300EQ496F6 205 aaPredicted RBP9.61□□□□□ -0.87
SS18-219ENST00000581570 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 SLC25A30Q5SVS4 291 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 MEDAGQ5VYS4 303 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 ZNF343Q6P1L6 599 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
SS18-219ENST00000581570 ZNF554Q86TJ5 538 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 GPR148Q8TDV2 347 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 GATAD1Q8WUU5 269 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 GALMQ96C23 342 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 LGALS12Q96DT0 336 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 IFI27L2Q9H2X8 130 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 WASHC3Q9Y3C0 194 aa9.61□□□□□ -0.87
SS18-219ENST00000581570 RYR1P21817 5038 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 RAB29O14966 203 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 DEDDO75618 318 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 OR2A4O95047 310 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 FASP25445 335 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
SS18-219ENST00000581570 AMIGO2Q86SJ2 522 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 BVESQ8NE79 360 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 MRPL30Q8TCC3 161 aaKnown RBP9.6□□□□□ -0.87
SS18-219ENST00000581570 GHSRQ92847 366 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 ZNF184Q99676 751 aaPredicted RBP9.6□□□□□ -0.87
SS18-219ENST00000581570 OVOL2Q9BRP0 275 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 KLK5Q9Y337 293 aaPredicted RBP9.6□□□□□ -0.87
SS18-219ENST00000581570 LRRC42Q9Y546 428 aa9.6□□□□□ -0.87
SS18-219ENST00000581570 SNTNA6NMZ2 147 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 AIREO43918 545 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 GPX5O75715 221 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 GLAP06280 429 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 FUT3P21217 361 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 GTF2A1P52655 376 aaPredicted RBP9.59□□□□□ -0.87
SS18-219ENST00000581570 GYS2P54840 703 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 SNRPGP62308 76 aaKnown RBP9.59□□□□□ -0.87
SS18-219ENST00000581570 DEFA5Q01523 94 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 GUCA2BQ16661 112 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 C6orf141Q5SZD1 244 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 GLIPR1L1Q6UWM5 242 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 OR5AN1Q8NGI8 311 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 ORAI1Q96D31 301 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms