RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 PGA5P0DJD9 388 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 OR12D1P0DN82 309 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 ATP4BP51164 291 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 LIM2P55344 173 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 MTPNP58546 118 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 TPPP2P59282 170 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 BTG1P62324 171 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 SRPXP78539 464 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 LAMTOR4Q0VGL1 99 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 C1DQ13901 141 aaKnown RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 MMDQ15546 238 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 CD226Q15762 336 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 KDM4DQ6B0I6 523 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 ZNF705AQ6ZN79 300 aaPredicted RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 FOXI2Q6ZQN5 318 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 ZNF788Q6ZQV5 615 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 C11orf53Q8IXP5 236 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 DEFB125Q8N687 156 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 NUP35Q8NFH5 326 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 OR2M3Q8NG83 312 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 OR5AP2Q8NGF4 316 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 OR10G6Q8NH81 332 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 RDH12Q96NR8 316 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 TMEM147Q9BVK8 224 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 SLC25A31Q9H0C2 315 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 TMEM9BQ9NQ34 198 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 NUDT4Q9NZJ9 180 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 C19orf25Q9UFG5 118 aaPredicted RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 PAM16Q9Y3D7 125 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 EVPLQ92817 2033 aa5.29□□□□□ -1.56
COPS3-216ENST00000579716 PRG4Q92954 1404 aaPredicted RBP5.29□□□□□ -1.56
COPS3-216ENST00000579716 SHANK2Q9UPX8 1470 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 TP53BP1Q12888 1972 aaPredicted RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 A0A1B0GWB2 263 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 COLCA2A8K830 154 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 ZNF705EA8MWA4 302 aaPredicted RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 SHISA9B4DS77 424 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 F6UB75 175 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 RRHO14718 337 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 MYL12BO14950 172 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 NPFFO15130 113 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 NDUFB8O95169 186 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 FGF6P10767 208 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 ERGP11308 486 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 RPS4Y1P22090 263 aaKnown RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 PFN2P35080 140 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 CTRLP40313 264 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 TIMM10P62072 90 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 RPS13P62277 151 aaKnown RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 SNRPD2P62316 118 aaKnown RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 TMEM267Q0VDI3 215 aaPredicted RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 ARFRP1Q13795 201 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 NRF1Q16656 503 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 BEAN1Q3B7T3 259 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 MIDNQ504T8 468 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 Q6ZVQ6 151 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 TCF23Q7RTU1 214 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 OR8D4Q8NGM9 314 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 C15orf40Q8WUR7 153 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 TMEM230Q96A57 120 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 OR4C12Q96R67 309 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 JPT2Q9H910 190 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 PARP11Q9NR21 331 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 KCNIP2Q9NS61 270 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 MARCH5Q9NX47 278 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 BET1LQ9NYM9 111 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 SLC2A6Q9UGQ3 507 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 TRMT112Q9UI30 125 aaKnown RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 IER3IP1Q9Y5U9 82 aa5.28□□□□□ -1.56
COPS3-216ENST00000579716 KDM6AO15550 1401 aaPredicted RBP5.28□□□□□ -1.56
COPS3-216ENST00000579716 DICER1Q9UPY3 1922 aaKnown RBP5.27□□□□□ -1.57
COPS3-216ENST00000579716 A0A087WZ39 114 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 A0A0G2JK05 382 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 A0A1W2PRS3 328 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 C5orf49A4QMS7 147 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 H0YJW9 148 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 SULT2B1O00204 365 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 OVOL1O14753 267 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 NCR2O95944 276 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 CXorf1O96002 111 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 ATP5G1P05496 136 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 SPNP16150 400 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 CD38P28907 300 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 PPP1CCP36873 323 aaKnown RBP5.27□□□□□ -1.57
COPS3-216ENST00000579716 PPICP45877 212 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 DHRS2Q13268 280 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 PDGFRLQ15198 375 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 FAM120AOSQ5T036 256 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 TSPO2Q5TGU0 170 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 LYRM7Q5U5X0 104 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 IGFL2Q6UWQ7 119 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 TMEM207Q6UWW9 146 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 HRCT1Q6UXD1 115 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 DGAT2L6Q6ZPD8 337 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 SGPP2Q8IWX5 399 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 ZNF440Q8IYI8 595 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms