RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 LSAMPQ13449 338 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TMEM30BQ3MIR4 351 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ACTBL2Q562R1 376 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 C6orf183Q5T699 404 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SYT6Q5T7P8 510 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR2G6Q5TZ20 316 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SLC25A48Q6ZT89 311 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF555Q8NEP9 628 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR10V1Q8NGI7 309 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ORAI1Q96D31 301 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SMIM19Q96E16 107 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CST11Q9H112 138 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 BABAM2Q9NXR7 383 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CNOT2Q9NZN8 540 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CKLFQ9UBR5 152 aa9.95□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 NBR2O15453 112 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OGG1O15527 345 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 IGFBP3P17936 291 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 MYL12AP19105 171 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CD40LGP29965 261 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF137PP52743 207 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 DYRK1AQ13627 763 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SMN1Q16637 294 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 UNQ5815/PRO19632Q6UWF5 114 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 LYG2Q86SG7 212 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PPP1R27Q86WC6 154 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR13C5Q8NGS8 318 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR4K15Q8NH41 348 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GHSRQ92847 366 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF355PQ9NSJ1 428 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 SLC23A1Q9UHI7 598 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 EXOSC1Q9Y3B2 195 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 NUBP2Q9Y5Y2 271 aa9.94□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TRBV5-5A0A0J9YX44 114 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 C13orf42A0A1B0GVH6 325 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 WBP4O75554 376 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GPX5O75715 221 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 HBZP02008 142 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 EGR2P11161 476 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF134P52741 427 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CX3CL1P78423 397 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 MED21Q13503 144 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PLGLAQ15195 96 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 Q499Y3 187 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 YIF1BQ5BJH7 314 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 RAB12Q6IQ22 244 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PYHIN1Q6K0P9 492 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GLIPR1L1Q6UWM5 242 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 JAGN1Q8N5M9 183 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF439Q8NDP4 499 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR1L1Q8NH94 360 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PHLDA1Q8WV24 401 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 MUL1Q969V5 352 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 MRPS24Q96EL2 167 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 RDH12Q96NR8 316 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 S100A14Q9HCY8 104 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 RCC2Q9P258 522 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PEX16Q9Y5Y5 336 aa9.93□□□□□ -0.82
CDK5RAP3-213ENST00000579605 DNAH2Q9P225 4427 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF785A8K8V0 405 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 FCN1O00602 326 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 LANCL1O43813 399 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TATDN3Q17R31 274 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CD300EQ496F6 205 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 STEAP3Q658P3 488 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZNF660Q6AZW8 331 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 AWAT2Q6E213 333 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 PQLC1Q8N2U9 271 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 ZFP41Q8N8Y5 198 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 LFNGQ8NES3 379 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CLCC1Q96S66 551 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 FBXL15Q9H469 300 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 BANF2Q9H503 90 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 OR2S2Q9NQN1 319 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 KCNIP1Q9NZI2 227 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CLEC2DQ9UHP7 191 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 RNF150Q9ULK6 438 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 DIMT1Q9UNQ2 313 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
CDK5RAP3-213ENST00000579605 TRAV8-7A0A075B6U6 113 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 A0A1B0GVY2 172 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 A0A1W2PPK0 400 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 XRCC3O43542 346 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 CA11O75493 328 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 NDUFB8O95169 186 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 BAG2O95816 211 aa9.91□□□□□ -0.82
CDK5RAP3-213ENST00000579605 LALBAP00709 142 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms