RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 INTS1Q8N201 2190 aaKnown RBP8.73□□□□□ -1.01
MSI2-209ENST00000579483 RNASEK-C17orf49H0YIS7 233 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 FAM166AQ6J272 317 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 TEPPQ6URK8 271 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 OR4X1Q8NH49 305 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 HIGD1AQ9Y241 93 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 IGHG3P01860 377 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 SSTP61278 116 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 H3F3AP84243 136 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 IRF3Q14653 427 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 CYB5R2Q6BCY4 276 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 IGFL3Q6UXB1 125 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.73□□□□□ -1.01
MSI2-209ENST00000579483 GSX2Q9BZM3 304 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 TRAV39A0A0B4J263 110 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 XAF1Q6GPH4 301 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 SLC24A4Q8NFF2 622 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 MRGPRFQ96AM1 343 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 WDR89Q96FK6 387 aaPredicted RBP8.73□□□□□ -1.01
MSI2-209ENST00000579483 DOK5Q9P104 306 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 MBD3L4A6NDZ8 208 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 MBD3L5A6NJ08 208 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 HYPMO75409 117 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 NDUFA6P56556 154 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 INSL4Q14641 139 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 VAX1Q5SQQ9 334 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 ACP7Q6ZNF0 438 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 OR10G4Q8NGN3 311 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 OR10G9Q8NGN4 311 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 AQP3Q92482 292 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 TCEAL7Q9BRU2 100 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 CACNA1HO95180 2353 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 PROB1E7EW31 1015 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 G6PCP35575 357 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 TGFBR1P36897 503 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 NANOS3P60323 173 aaKnown RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
MSI2-209ENST00000579483 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 C16orf82Q7Z2V1 217 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 DRAXINQ8NBI3 349 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 AKIP1Q9NQ31 210 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 NAGKQ9UJ70 344 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 B4DSR2 109 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 H0Y980 276 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 ZDHHC11Q9H8X9 412 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 MMP24Q9Y5R2 645 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 OXA1LQ15070 435 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 BAK1Q16611 211 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 SP5Q6BEB4 398 aaPredicted RBP8.72□□□□□ -1.01
MSI2-209ENST00000579483 SLC35E3Q7Z769 313 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 ABHD14BQ96IU4 210 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 LINC00312Q9Y6C7 94 aa8.72□□□□□ -1.01
MSI2-209ENST00000579483 IGHV3-72A0A0B4J1Y9 119 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 MAP1LC3B2A6NCE7 125 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 SPINK9Q5DT21 86 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 DDB2Q92466 427 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 LSM10Q969L4 123 aaKnown RBP8.71□□□□□ -1.01
MSI2-209ENST00000579483 MAP1LC3BQ9GZQ8 125 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 OR2T8A6NH00 312 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 GCM2O75603 506 aaPredicted RBP8.71□□□□□ -1.01
MSI2-209ENST00000579483 S1PR2O95136 353 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 TSPOP30536 169 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 SULT1A1P50225 295 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 RP1P56715 2156 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 EXOSC2Q13868 293 aaKnown RBP8.71□□□□□ -1.01
MSI2-209ENST00000579483 KHDC3LQ587J8 217 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 NHLRC2Q8NBF2 726 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 TVP23CQ96ET8 276 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 TUBA4BQ9H853 241 aa8.71□□□□□ -1.01
MSI2-209ENST00000579483 FAM24AA6NFZ4 105 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 CDRT15L2A8MXV6 281 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 NDUFS8O00217 210 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 MPDU1O75352 247 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 NUTF2P61970 127 aaKnown RBP8.71□□□□□ -1.02
MSI2-209ENST00000579483 PSG7Q13046 419 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 RAB32Q13637 225 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 CLEC18BQ6UXF7 455 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 OR52B4Q8NGK2 314 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
MSI2-209ENST00000579483 CACNA1IQ9P0X4 2223 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 IGKV3-7A0A075B6H7 116 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 C1QTNF9P0C862 333 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 PTHLHP12272 177 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 ERVFC1-1P60608 527 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 CLEC12BQ2HXU8 276 aa8.71□□□□□ -1.02
MSI2-209ENST00000579483 PARP12Q9H0J9 701 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms