RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 GAL3ST2Q9H3Q3 398 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 PLEKHJ1Q9NW61 149 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 ING3Q9NXR8 418 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 OR1A1Q9P1Q5 309 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 JPT1Q9UK76 154 aa3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 RBMX2Q9Y388 322 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 TBL2Q9Y4P3 447 aaKnown RBP3.04□□□□□ -1.92
SMARCE1-215ENST00000578995 VWFP04275 2813 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 IGKV1D-13A0A0B4J2D9 117 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A1W2PRD5 423 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A1W2PRF3 423 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A1W2PRM7 423 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 FUOMA2VDF0 154 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 METTL21EPA6NDL7 271 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 A6NDX4 124 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 DNAJC9-AS1A6NH13 148 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 TRDCB7Z8K6 153 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 BUB1B-PAK6H3BSN5 160 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 H3BUI4 141 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 CLDN34H7C241 214 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 SDCBPO00560 298 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 CTDSPLO15194 276 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 FABP7O15540 132 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 GSTZ1O43708 216 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 LANCL1O43813 399 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 CHST1O43916 411 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 IGHV3-7P01780 117 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 IGHV4-59P01825 116 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 AMY1AP04745 511 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 AMY2AP04746 511 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF735P0CB33 412 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 IGKV1-13P0DP09 117 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 SRD5A1P18405 259 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 COX7A1P24310 79 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 PPP1CCP36873 323 aaKnown RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 IER3P46695 156 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 BRWD1-AS2P59051 145 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF816Q0VGE8 651 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MADCAM1Q13477 382 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 EBI3Q14213 229 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 SLC9A3R2Q15599 337 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 FAM189A2Q15884 450 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 AANATQ16613 207 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 CNPY1Q3B7I2 92 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 KRTAP24-1Q3LI83 254 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM69Q5SWH9 247 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 C6orf183Q5T699 404 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 TPTE2P1Q5T6R2 138 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MINOS1Q5TGZ0 78 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 GPR157Q5UAW9 335 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 STEAP3Q658P3 488 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 OR52W1Q6IF63 320 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 Q6ZSN1 163 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF833PQ6ZTB9 187 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 TRAPPC6BQ86SZ2 158 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 PDZD9Q8IXQ8 264 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ABHD12Q8N2K0 398 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 SIGLECL1Q8N7X8 197 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF565Q8N9K5 539 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 OR4A4PQ8NGN8 299 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 OR6Q1Q8NGQ2 317 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 OR52I2Q8NH67 350 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 OR9G1Q8NH87 305 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MCFD2Q8NI22 146 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 NEK7Q8TDX7 302 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 WIPF2Q8TF74 440 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 DDB2Q92466 427 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ARL11Q969Q4 196 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 DGCR14Q96DF8 476 aaKnown RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 C11orf54Q9H0W9 315 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MMP28Q9H239 520 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MMP27Q9H306 513 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 RIMS4Q9H426 269 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 AKIP1Q9NQ31 210 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 AURKAIP1Q9NWT8 199 aaPredicted RBP3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 NDUFA13Q9P0J0 144 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 EXTL2Q9UBQ6 330 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 ANXA10Q9UJ72 324 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 TRAPPC2LQ9UL33 140 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 MINOS1-NBL1R4GNA1 71 aa3.03□□□□□ -1.92
SMARCE1-215ENST00000578995 SAA2-SAA4A0A096LPE2 208 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 A0A0A6YYJ9 748 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 A0A1W2PPH5 198 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 MEIS3P1A6NDR6 274 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF736B4DX44 427 aaPredicted RBP3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 SULT1C2O00338 296 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 HOXA3O43365 443 aaPredicted RBP3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 CD74P04233 296 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 ARG1P05089 322 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 LPLP06858 475 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 SAA2P0DJI9 122 aaPredicted RBP3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 HNF1AP20823 631 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 NFYBP25208 207 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 RANBP1P43487 201 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 OR3A3P47888 321 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 GNG10P50151 68 aa3.02□□□□□ -1.93
SMARCE1-215ENST00000578995 LINC00205P59089 165 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms