RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	OR4F5	Q8NH21	305 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	CLDND2	Q8NHS1	167 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	OR4F4	Q96R69	305 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	ATP5S	Q99766	215 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	DECR2	Q9NUI1	292 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	SLC39A9	Q9NUM3	307 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZZEF1	O43149	2961 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	C17orf98	A8MV24	154 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BK	O60814	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	PITX3	O75364	302 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	IFNA4	P05014	189 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BJ	P06899	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	SELL	P14151	372 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BO	P23527	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BB	P33778	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	EDDM3B	P56851	147 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BD	P58876	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BC	P62807	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	ID3	Q02535	119 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	RHEB	Q15382	184 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST2H2BE	Q16778	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	CST9LP1	Q5W188	147 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	FGFRL1	Q8N441	504 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	DRAM1	Q8N682	238 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BH	Q93079	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	RCC1L	Q96I51	464 aa	Known RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BN	Q99877	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HIST1H2BM	Q99879	126 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	PSG11	Q9UQ72	335 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	LAMP3	Q9UQV4	416 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	STRAP	Q9Y3F4	350 aa	Known RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	TRAV38-1	A0A0B4J264	116 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	S1PR2	O95136	353 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	CER1	O95813	267 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HEXA	P06865	529 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	MYOD1	P15172	320 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	FKBP2	P26885	142 aa	Known RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	NKX6-1	P78426	367 aa	Predicted RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	PRB3	Q04118	309 aa	Predicted RBP	12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	SSPN	Q14714	243 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001		Q3ZCU0	254 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	HEPN1	Q6WQI6	88 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	FAM122A	Q96E09	287 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	TVP23C	Q96ET8	276 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	TANC2	Q9HCD6	1990 aa		12.51	□□□□□ -0.41
PRPF8-216	ENST00000577001	KIR2DS1	A0A191URI9	304 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	MAP1LC3B2	A6NCE7	125 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	NKX2-8	O15522	239 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	MPL	P40238	635 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	KIR2DS4	P43632	304 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	DUSP3	P51452	185 aa	Predicted RBP	12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	GAMT	Q14353	236 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	KIR2DS1	Q14954	304 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	DEFB123	Q8N688	67 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF610	Q8N9Z0	462 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	POM121	Q96HA1	1249 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	SMIM7	Q9BQ49	75 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	CABLES2	Q9BTV7	478 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	MAP1LC3B	Q9GZQ8	125 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	C1QTNF9B	B2RNN3	333 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	PHOX2A	O14813	284 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	HSPB1	P04792	205 aa	Known RBP	12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	UCP1	P25874	307 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	GNG3	P63215	75 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	MEGF10	Q96KG7	1140 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	FAM173A	Q9BQD7	235 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ARV1	Q9H2C2	271 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	CDH20	Q9HBT6	801 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	B4GALT7	Q9UBV7	327 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	COL5A1	P20908	1838 aa	Predicted RBP	12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	LRBA	P50851	2863 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	TAS2R30	P59541	319 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	HLA-DRB3	P79483	266 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	SLC10A1	Q14973	349 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF585B	Q52M93	769 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001		Q6ZR03	302 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ABHD5	Q8WTS1	349 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	FAM210B	Q96KR6	192 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	RNF115	Q9Y4L5	304 aa		12.5	□□□□□ -0.41
PRPF8-216	ENST00000577001	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	UBE2C	O00762	179 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	UBE2N	P61088	152 aa	Known RBP	12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	TLE4	Q04727	773 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNRD1	Q9P1U0	126 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	SPRR3	Q9UBC9	169 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	SH3BGRL2	Q9UJC5	107 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF737	O75373	536 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	SLC38A11	Q08AI6	406 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	KHDC3L	Q587J8	217 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	LYPD6B	Q8NI32	183 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	C10orf35	Q96D05	121 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	TMEM56	Q96MV1	263 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	TMEM56-RWDD3	S4R434	201 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	S100G	P29377	79 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	SOX8	P57073	446 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	ASCL4	Q6XD76	172 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	DERL1	Q9BUN8	251 aa		12.49	□□□□□ -0.41
PRPF8-216	ENST00000577001	PRDM14	Q9GZV8	571 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms