RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.7
RPAIN-216ENST00000575599 FOXI3A8MTJ6 420 aaPredicted RBP10.65□□□□□ -0.71
RPAIN-216ENST00000575599 LY6LH3BQJ8 138 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 HBZP02008 142 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 LPLP06858 475 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 GSTT2BP0CG30 244 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 PTHLHP12272 177 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 LOXL3P58215 753 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF57Q68EA5 555 aaPredicted RBP10.65□□□□□ -0.71
RPAIN-216ENST00000575599 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 OR52M1Q8NGK5 317 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 SETD6Q8TBK2 473 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 RIMS4Q9H426 269 aaPredicted RBP10.65□□□□□ -0.71
RPAIN-216ENST00000575599 RANBP3Q9H6Z4 567 aaPredicted RBP10.65□□□□□ -0.71
RPAIN-216ENST00000575599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.71
RPAIN-216ENST00000575599 AK3Q9UIJ7 227 aa10.65□□□□□ -0.71
RPAIN-216ENST00000575599 OOSP1A8MZH6 123 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 GSTZ1O43708 216 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-216ENST00000575599 PROK1P58294 105 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 AP3S2P59780 193 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 ACTBP60709 375 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 DGCR2P98153 550 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
RPAIN-216ENST00000575599 DIAPH2-AS1Q14236 149 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 C5orf24Q7Z6I8 188 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 OR52I2Q8NH67 350 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 OR2T6Q8NHC8 308 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 SMIM4Q8WVI0 70 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 NUDCD2Q8WVJ2 157 aa10.64□□□□□ -0.71
RPAIN-216ENST00000575599 MBNL3Q9NUK0 354 aaKnown RBP10.64□□□□□ -0.71
RPAIN-216ENST00000575599 MEIS3P1A6NDR6 274 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 HSD17B6O14756 317 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 TIMM23O14925 209 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 SLC31A2O15432 143 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 UPK1BO75841 260 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 REG1BP48304 166 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 HABP2Q14520 560 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-216ENST00000575599 TMEM30BQ3MIR4 351 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 FBLN7Q53RD9 439 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 TOMM5Q8N4H5 51 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 OR56B4Q8NH76 319 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 SGMS2Q8NHU3 365 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 CAPSLQ8WWF8 208 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 HDHD3Q9BSH5 251 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-216ENST00000575599 ST6GALNAC5Q9BVH7 336 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF702PQ9H963 129 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 C12orf4Q9NQ89 552 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 TAS2R8Q9NYW2 309 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 ELF5Q9UKW6 265 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-216ENST00000575599 KCNK7Q9Y2U2 307 aa10.63□□□□□ -0.71
RPAIN-216ENST00000575599 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 CSF1P09603 554 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 IL7P13232 177 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 RCVRNP35243 200 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 KIR2DS4P43632 304 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 RAB7AP51149 207 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 DEFA1P59665 94 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 DEFA3P59666 94 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 SSBP1Q04837 148 aaKnown RBP10.62□□□□□ -0.71
RPAIN-216ENST00000575599 GNMTQ14749 295 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 BAK1Q16611 211 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 ARSJQ5FYB0 599 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-216ENST00000575599 DRAM1Q8N682 238 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 GPX8Q8TED1 209 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 SLC25A33Q9BSK2 321 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 PALMDQ9NP74 551 aa10.62□□□□□ -0.71
RPAIN-216ENST00000575599 LINC00854A0A1B0GVQ3 168 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 CENPXA8MT69 81 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 NAPSAO96009 420 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 FCER2P06734 321 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 SNRNP70P08621 437 aaKnown RBP10.61□□□□□ -0.71
RPAIN-216ENST00000575599 FAM106CPP0CH98 169 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 DTYMKP23919 212 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 IL3RAP26951 378 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
RPAIN-216ENST00000575599 BLCAPP62952 87 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 HES1Q14469 280 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 HMGN3Q15651 99 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 Q6ZPA2 131 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 MOB3BQ86TA1 216 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF554Q86TJ5 538 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 OR8H3Q8N146 312 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 C8orf31Q8N9H6 132 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF439Q8NDP4 499 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 IL1F10Q8WWZ1 152 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 GALMQ96C23 342 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 AKR1E2Q96JD6 320 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 SDHCQ99643 169 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-216ENST00000575599 CITED1Q99966 193 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 KLK11Q9UBX7 282 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 MTFP1Q9UDX5 166 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
RPAIN-216ENST00000575599 MGAT4AQ9UM21 535 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms