RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 NMSQ5H8A3 153 aa8.78□□□□□ -1
USP43-205ENST00000574408 CXorf66Q5JRM2 361 aaPredicted RBP8.78□□□□□ -1
USP43-205ENST00000574408 CYB5R2Q6BCY4 276 aa8.78□□□□□ -1
USP43-205ENST00000574408 ZNF600Q6ZNG1 722 aa8.78□□□□□ -1
USP43-205ENST00000574408 MRGPRGQ86SM5 289 aa8.78□□□□□ -1
USP43-205ENST00000574408 CD177Q8N6Q3 437 aa8.78□□□□□ -1
USP43-205ENST00000574408 OR5T1Q8NG75 326 aa8.78□□□□□ -1
USP43-205ENST00000574408 RNASE11Q8TAA1 199 aaKnown RBP8.78□□□□□ -1
USP43-205ENST00000574408 GALMQ96C23 342 aa8.78□□□□□ -1
USP43-205ENST00000574408 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
USP43-205ENST00000574408 USF3Q68DE3 2245 aa8.78□□□□□ -1
USP43-205ENST00000574408 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1
USP43-205ENST00000574408 IFNL4K9M1U5 179 aa8.77□□□□□ -1
USP43-205ENST00000574408 GPR137BO60478 399 aa8.77□□□□□ -1
USP43-205ENST00000574408 YIF1AO95070 293 aa8.77□□□□□ -1
USP43-205ENST00000574408 IGLV2-14P01704 120 aa8.77□□□□□ -1
USP43-205ENST00000574408 HBZP02008 142 aa8.77□□□□□ -1
USP43-205ENST00000574408 CD40P25942 277 aa8.77□□□□□ -1
USP43-205ENST00000574408 PRDX2P32119 198 aa8.77□□□□□ -1
USP43-205ENST00000574408 CAMLGP49069 296 aa8.77□□□□□ -1
USP43-205ENST00000574408 F2RL1P55085 397 aa8.77□□□□□ -1
USP43-205ENST00000574408 RPS23P62266 143 aaKnown RBP8.77□□□□□ -1
USP43-205ENST00000574408 ZNF674Q2M3X9 581 aa8.77□□□□□ -1
USP43-205ENST00000574408 FAM53AQ6NSI3 398 aaPredicted RBP8.77□□□□□ -1
USP43-205ENST00000574408 Q6ZRG5 221 aa8.77□□□□□ -1
USP43-205ENST00000574408 STX12Q86Y82 276 aa8.77□□□□□ -1
USP43-205ENST00000574408 MEGF10Q96KG7 1140 aa8.77□□□□□ -1
USP43-205ENST00000574408 RHOVQ96L33 236 aa8.77□□□□□ -1
USP43-205ENST00000574408 MRPL37Q9BZE1 423 aaKnown RBP8.77□□□□□ -1
USP43-205ENST00000574408 UQCC1Q9NVA1 299 aa8.77□□□□□ -1
USP43-205ENST00000574408 NDRG3Q9UGV2 375 aa8.77□□□□□ -1
USP43-205ENST00000574408 RNF150Q9ULK6 438 aa8.77□□□□□ -1
USP43-205ENST00000574408 NBASA2RRP1 2371 aa8.77□□□□□ -1
USP43-205ENST00000574408 BSNQ9UPA5 3926 aa8.77□□□□□ -1
USP43-205ENST00000574408 IGHV3OR15-7A0A075B7D8 119 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 OOEPA6NGQ2 149 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 SRRM5B3KS81 715 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 FGF16O43320 207 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 SSSCA1O60232 199 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 MDKP21741 143 aaPredicted RBP8.77□□□□□ -1.01
USP43-205ENST00000574408 P2RY1P47900 373 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 FHITP49789 147 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 OR52L2PQ8NGH6 319 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 ITLN1Q8WWA0 313 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 PKDREJQ9NTG1 2253 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 C16orf97H3BN30 126 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 JTBO76095 146 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 MUC1P15941 1255 aaPredicted RBP8.77□□□□□ -1.01
USP43-205ENST00000574408 S100A2P29034 98 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 CAV2P51636 162 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 SELENOVP59797 346 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
USP43-205ENST00000574408 DRAM1Q8N682 238 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 GCSAMQ8N6F7 178 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 OR13A1Q8NGR1 328 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 IL22RA2Q969J5 263 aa8.77□□□□□ -1.01
USP43-205ENST00000574408 IGLV3-9A0A075B6K5 115 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 A0A0G2JRQ6 117 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 RNASEK-C17orf49H0YIS7 233 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 GAPDHP04406 335 aaKnown RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 SSTR5P35346 364 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 NHLH2Q02577 135 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 GPR157Q5UAW9 335 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 EIF4E3Q8N5X7 224 aaKnown RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 RFESDQ8TAC1 157 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 NINJ1Q92982 152 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 DCTN5Q9BTE1 182 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 IGKV1D-17A0A075B6S4 117 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 A0A1W2PPE2 198 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 FAM24AA6NFZ4 105 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 FAM157CP0CG43 387 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 RAB2AP61019 212 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 IZUMO4Q1ZYL8 232 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 UNKLQ9H9P5 680 aaKnown RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 IGHV3-43A0A0B4J1X8 118 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 WRBO00258 174 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 ATXN7O15265 892 aaPredicted RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 IGHV3-43DP0DP04 118 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 PPP1CCP36873 323 aaKnown RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 VAMP2P63027 116 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 OR2C3Q8N628 320 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 OR2D2Q9H210 308 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 WFDC1Q9HC57 220 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 LIN7CQ9NUP9 197 aaKnown RBP8.76□□□□□ -1.01
USP43-205ENST00000574408 LPAR3Q9UBY5 353 aa8.76□□□□□ -1.01
USP43-205ENST00000574408 A0A1W2PPE3 182 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 ZNF737O75373 536 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 HOXA1P49639 335 aaPredicted RBP8.75□□□□□ -1.01
USP43-205ENST00000574408 FAM201AQ5SY85 155 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 TMEM108Q6UXF1 575 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 ZNF808Q8N4W9 903 aaPredicted RBP8.75□□□□□ -1.01
USP43-205ENST00000574408 FAM213BQ8TBF2 198 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 GPR146Q96CH1 333 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 PLEKHF2Q9H8W4 249 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 BORCS7-ASMTA0A0B4J1R7 106 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
USP43-205ENST00000574408 EWSR1Q01844 656 aaKnown RBP eCLIP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms