RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TMEM269A0A1B0GVZ9 245 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 A0A1W2PPK0 400 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 A4D1N5 150 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 FAM25AB3EWG3 89 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 FAM25CB3EWG5 89 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 FAM25GB3EWG6 89 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 ZNF878C9JN71 531 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 F5H697 171 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 M0QZK8 103 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 SLC17A2O00624 439 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 CDIPTO14735 213 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 IGLV3-1P01715 115 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 LCATP04180 440 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 CD2P06729 351 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 H2BFMP0C1H6 154 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 UBCP0CG48 685 aaKnown RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 CCL1P22362 96 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 OTX1P32242 354 aaPredicted RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 BRS3P32247 399 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 TALDO1P37837 337 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 RPL31P62899 125 aaKnown RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 PITPNAQ00169 270 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 IL18Q14116 193 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 ZNF273Q14593 569 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 PNLIPRP3Q17RR3 467 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 RSPO1Q2MKA7 263 aaPredicted RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 CXorf66Q5JRM2 361 aaPredicted RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 C1orf100Q5SVJ3 147 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 MINOS1Q5TGZ0 78 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 ACSM6Q6P461 480 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 TMEM88Q6PEY1 159 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 GLDNQ6ZMI3 551 aaPredicted RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 CFAP77Q6ZQR2 320 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 PRSS45Q7RTY3 260 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 NRARPQ7Z6K4 114 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 HAPLN4Q86UW8 402 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 NAA40Q86UY6 237 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 CDH26Q8IXH8 852 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 STPG2Q8N412 459 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 DRAXINQ8NBI3 349 aaPredicted RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 CCDC54Q8NEL0 328 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 OR1M1Q8NGA1 313 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 OR51A4Q8NGJ6 313 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 OR8S1Q8NH09 359 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 C15orf40Q8WUR7 153 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 C4orf3Q8WVX3 66 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 SLAMF6Q96DU3 332 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 SLC25A38Q96DW6 304 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 PLEKHA1Q9HB21 404 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 RBFOX1Q9NWB1 397 aaKnown RBP5.3□□□□□ -1.56
CHD3-213ENST00000571249 ATPIF1Q9UII2 106 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 SLC22A13Q9Y226 551 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 MINOS1-NBL1R4GNA1 71 aa5.3□□□□□ -1.56
CHD3-213ENST00000571249 VPS13BQ7Z7G8 4022 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 A0A1B0GTI1 187 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 OR2AT4A6NND4 320 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 NPIPB5A8MRT5 1133 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 C17orf98A8MV24 154 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 C16orf90A8MZG2 172 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 F5H5K5 113 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 LCE2BO14633 110 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 TRIAP1O43715 76 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 APOC1P02654 83 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 TTRP02766 147 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 ACSM4P0C7M7 580 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 TRAPPC2P0DI81 140 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 TRAPPC2BP0DI82 140 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 DDOSTP39656 456 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 RANBP1P43487 201 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 SOX2P48431 317 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 CAMPP49913 170 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 GRB2P62993 217 aaKnown RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 MRPS10P82664 201 aaKnown RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 ZNF92Q03936 586 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 KRTAP27-1Q3LI81 207 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 IGSF11Q5DX21 431 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 BCL2L15Q5TBC7 163 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 TRIQKQ629K1 86 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 GJC3Q8NFK1 279 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 OR2AJ1Q8NGZ0 328 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 ZNF671Q8TAW3 534 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 LGALS14Q8TCE9 139 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 SMIM4Q8WVI0 70 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 PTX4Q96A99 478 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 RFT1Q96AA3 541 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 ORAI1Q96D31 301 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 C7orf50Q9BRJ6 194 aaKnown RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 SRSF8Q9BRL6 282 aaKnown RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 THAP7Q9BT49 309 aaPredicted RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 PBOV1Q9GZY1 135 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 SIGLEC8Q9NYZ4 499 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 NLKQ9UBE8 527 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 DHDHQ9UQ10 334 aa5.29□□□□□ -1.56
CHD3-213ENST00000571249 RBMX2Q9Y388 322 aaKnown RBP5.29□□□□□ -1.56
CHD3-213ENST00000571249 RHBDD3Q9Y3P4 386 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms