RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ASXL3Q9C0F0 2248 aa13.1□□□□□ -0.31
SMG6-207ENST00000570756 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 PAGE4O60829 102 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
SMG6-207ENST00000570756 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 OR5T1Q8NG75 326 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 WNT5BQ9H1J7 359 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 PDE6DO43924 150 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 DSCR4P56555 118 aaPredicted RBP13.09□□□□□ -0.31
SMG6-207ENST00000570756 SOX8P57073 446 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 MRPS11P82912 194 aaKnown RBP13.09□□□□□ -0.31
SMG6-207ENST00000570756 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 OPN3Q9H1Y3 402 aaPredicted RBP13.09□□□□□ -0.31
SMG6-207ENST00000570756 WNT16Q9UBV4 365 aa13.09□□□□□ -0.31
SMG6-207ENST00000570756 GJE1A6NN92 205 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 DEGS1O15121 323 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 TMPRSS2O15393 492 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 CLDN1O95832 211 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 EDN3P14138 238 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 DEFB119Q8N690 84 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 PSMF1Q92530 271 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 FOXB1Q99853 325 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 DNPH1O43598 174 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 WDR74Q6RFH5 385 aaPredicted RBP13.08□□□□□ -0.32
SMG6-207ENST00000570756 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 ALKBH3Q96Q83 286 aaPredicted RBP13.08□□□□□ -0.32
SMG6-207ENST00000570756 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 C1QTNF5Q9BXJ0 243 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 OR51B6Q9H340 312 aa13.08□□□□□ -0.32
SMG6-207ENST00000570756 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
SMG6-207ENST00000570756 CNTRLQ7Z7A1 2325 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 LNP1A1A4G5 178 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 YPEL1O60688 119 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 UMODP07911 640 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 GLB1P16278 677 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 TNFSF10P50591 281 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 RAC1P63000 192 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 DIRC2Q96SL1 478 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 A0A0J9YW62 118 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 HS3ST1O14792 307 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 NUPR1O60356 82 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 SERPINA7P05543 415 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 LIFP15018 202 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 GPM6AP51674 278 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
SMG6-207ENST00000570756 COL5A1-AS1Q5SY13 56 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 TPTE2P1Q5T6R2 138 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
SMG6-207ENST00000570756 EML6Q6ZMW3 1958 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 A0A1B0GUS0 222 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 NPIPB11E5RHQ5 1161 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 IL6RP08887 468 aaPredicted RBP13.06□□□□□ -0.32
SMG6-207ENST00000570756 ZNF16P17020 682 aaPredicted RBP13.06□□□□□ -0.32
SMG6-207ENST00000570756 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 SGMS2Q8NHU3 365 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 SRXN1Q9BYN0 137 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 ZDHHC11Q9H8X9 412 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 PLA2G3Q9NZ20 509 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 MTCH1Q9NZJ7 389 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
SMG6-207ENST00000570756 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ESDP10768 282 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 CD82P27701 267 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ADMP35318 185 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 MPLP40238 635 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 SELENOTP62341 195 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 OR5I1Q13606 314 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 CEACAM21Q3KPI0 293 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 Q6ZS52 159 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 Q6ZWC4 215 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ZDHHC23Q8IYP9 409 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 IL1F10Q8WWZ1 152 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 RBM7Q9Y580 266 aaKnown RBP13.05□□□□□ -0.32
SMG6-207ENST00000570756 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ZIC3O60481 467 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 SCRG1O75711 98 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 RAC3P60763 192 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 BATFQ16520 125 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms