RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ALKBH2Q6NS38 261 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 ZNF645Q8N7E2 425 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 LHFPL5Q8TAF8 219 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 LSM10Q969L4 123 aaKnown RBP13.96□□□□□ -0.17
RAB40C-210ENST00000566290 GSX2Q9BZM3 304 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 MED9Q9NWA0 146 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 PPP1R3CQ9UQK1 317 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 UBE2J1Q9Y385 318 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-210ENST00000566290 IGHV3-64DA0A0J9YX35 117 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 MPTX1A8MV57 137 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 RLN2P04090 185 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 CGB3P0DN86 165 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 CGB7P0DN87 165 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 MMP9P14780 707 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 NUP62P37198 522 aaPredicted RBP13.95□□□□□ -0.18
RAB40C-210ENST00000566290 EIF4EBP1Q13541 118 aaPredicted RBP13.95□□□□□ -0.18
RAB40C-210ENST00000566290 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 SELENOHQ8IZQ5 122 aaKnown RBP13.95□□□□□ -0.18
RAB40C-210ENST00000566290 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 SLC35G3Q8N808 338 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 OR4D5Q8NGN0 318 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 EDARADDQ8WWZ3 215 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 DCUN1D4Q92564 292 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 CORO2AQ92828 525 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 ARPC5LQ9BPX5 153 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 ZNF665Q9H7R5 613 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 GAB2Q9UQC2 676 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 RNF115Q9Y4L5 304 aa13.95□□□□□ -0.18
RAB40C-210ENST00000566290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
RAB40C-210ENST00000566290 C3orf80F5H4A9 247 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 LGALS8O00214 317 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 SIGLEC5O15389 551 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 GLIPR1P48060 266 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 SP6Q3SY56 376 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 LRRC37A5PQ49AS3 106 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 SPRNQ5BIV9 151 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 TMEM268Q5VZI3 342 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 ADAM5Q6NVV9 412 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 LYZL2Q7Z4W2 148 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 ZNF695Q8IW36 515 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 OR13A1Q8NGR1 328 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 IL1F10Q8WWZ1 152 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 PLPPR2Q96GM1 343 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 PRR13Q9NZ81 148 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
RAB40C-210ENST00000566290 TRAV38-1A0A0B4J264 116 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 NKX6-3A6NJ46 265 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 E5RGE8 158 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 E7EQL1 145 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 YPEL1O60688 119 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 CFDP00746 253 aaPredicted RBP13.93□□□□□ -0.18
RAB40C-210ENST00000566290 CEACAM6P40199 344 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 EIF5AP63241 154 aaKnown RBP13.93□□□□□ -0.18
RAB40C-210ENST00000566290 ZNF66Q6ZN08 573 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 OR10A7Q8NGE5 316 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 OR52M1Q8NGK5 317 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 OR1S1Q8NH92 325 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 ST8SIA2Q92186 375 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 GAFA1Q96PS6 74 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 SAP30LQ9HAJ7 183 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 LPAR3Q9UBY5 353 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 NSG2Q9Y328 171 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 POMT1Q9Y6A1 747 aa13.93□□□□□ -0.18
RAB40C-210ENST00000566290 A0A1B0GU03 582 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 HSD17B6O14756 317 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 ST8SIA3O43173 380 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 LY6G6DO95868 133 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 PLAUP00749 431 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 GAPDHP04406 335 aaKnown RBP13.92□□□□□ -0.18
RAB40C-210ENST00000566290 P2RY1P47900 373 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 RAB14P61106 215 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 MEF2CQ06413 473 aaPredicted RBP13.92□□□□□ -0.18
RAB40C-210ENST00000566290 CATR1Q13166 79 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 Q3ZCU0 254 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 GPR157Q5UAW9 335 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 FAM219AQ8IW50 185 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 C11orf1Q9H5F2 150 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
RAB40C-210ENST00000566290 K7EPK0 472 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 NDUFA2O43678 99 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 GOSR1O95249 250 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 MBPP02686 304 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-210ENST00000566290 CD80P33681 288 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 PPOXP50336 477 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 SWI5Q1ZZU3 235 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 MST1LQ2TV78 715 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-210ENST00000566290 LRRC20Q8TCA0 184 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 MRGPRDQ8TDS7 321 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 ARL11Q969Q4 196 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 MBD6Q96DN6 1003 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 RRNAD1Q96FB5 475 aaKnown RBP13.91□□□□□ -0.18
RAB40C-210ENST00000566290 SLC25A32Q9H2D1 315 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms