RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 IGLC3P0DOY3 106 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 BIDP55957 195 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF121P58317 390 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 PLPPR5Q32ZL2 321 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 C1orf185Q5T7R7 199 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 CARD17Q5XLA6 110 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 SAXO1Q8IYX7 474 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 DYRK2Q92630 601 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 LOXL4Q96JB6 756 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 C19orf25Q9UFG5 118 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 RNF114Q9Y508 228 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 A0A0U1RQV5 110 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 DIRC3C9JPN6 131 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 CER1O95813 267 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 PPP1CBP62140 327 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 CRIP3Q6Q6R5 217 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 OR4F5Q8NH21 305 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 DDIT4LQ96D03 193 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 LIN37Q96GY3 246 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 OR4F4Q96R69 305 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM222Q9H0R3 208 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 ZDHHC11Q9H8X9 412 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 MPPED1O15442 326 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 IGHMP01871 453 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 FCGR2AP12318 317 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 PLA2G5P39877 138 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 PAX9P55771 341 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 ID3Q02535 119 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 IL11RAQ14626 422 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 C1orf174Q8IYL3 243 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 SIGLEC12Q96PQ1 595 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 ARRDC1-AS1Q9H2J1 176 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF703Q9H7S9 590 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
GTF3C1-203ENST00000562609 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM250H0YL14 139 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 HERV-K104P61576 105 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 MFAP5Q13361 173 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 VAMP3Q15836 100 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 BRICD5Q6PL45 260 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 ASB10Q8WXI3 467 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 GPHA2Q96T91 129 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 RNF2Q99496 336 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 POLR1DQ9Y2S0 133 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF468Q5VIY5 522 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 PSMF1Q92530 271 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 SLC39A9Q9NUM3 307 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 BET1LQ9NYM9 111 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 ST3GAL6Q9Y274 331 aa11.96□□□□□ -0.49
GTF3C1-203ENST00000562609 IGHV1-45A0A0A0MS14 117 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 SERPINA7P05543 415 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 CCL3P10147 92 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 CDAP32320 146 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 NPBWR2P48146 333 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 PSMB3P49720 205 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 SRPXP78539 464 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 MORN2Q502X0 79 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 ERASQ7Z444 233 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 TMEM144Q7Z5S9 345 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 C20orf196Q8IYI0 205 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 SELENOHQ8IZQ5 122 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 OR2M3Q8NG83 312 aa11.96□□□□□ -0.5
GTF3C1-203ENST00000562609 OR6C6A6NF89 314 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 COX6A1P12074 109 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 CRISP2P16562 243 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 BMP5P22003 454 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 TNFSF4P23510 183 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 BAGE3Q86Y29 109 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 PIGTQ969N2 578 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 LAMA5O15230 3695 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 MYO7BQ6PIF6 2116 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 ZFHX4Q86UP3 3567 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 F2Z2F3 143 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 SH2D1BO14796 132 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 MPLP40238 635 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 Q8N976 141 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 ABHD14BQ96IU4 210 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 MOB1AQ9H8S9 216 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 KLHL13Q9P2N7 655 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 DMXL1Q9Y485 3027 aa11.95□□□□□ -0.5
GTF3C1-203ENST00000562609 TRAV30A0A087WSZ9 112 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 IGHV3-15A0A0B4J1V0 119 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 WNT2P09544 360 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms