RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 Q0VFX4 171 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 KIAA2026Q5HYC2 2103 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 ACSM6Q6P461 480 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 FGFRL1Q8N441 504 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 SPOCK3Q9BQ16 436 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 A8MWP6 167 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 K7ESF4 209 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 HRASP01112 189 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 CA6P23280 308 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 CEACAM6P40199 344 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 CYB561P49447 251 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 GFRA1P56159 465 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 OR5B21A6NL26 309 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 CFIP05156 583 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 APLNRP35414 380 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 LURAP1Q96LR2 239 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 LINC00470Q9BZP3 86 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 R4GN57 208 aa11.82□□□□□ -0.52
VPS9D1-202ENST00000561976 CTXND1A0A1B0GTU2 59 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 GYPAP02724 150 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 COX5BP10606 129 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 RPS16P62249 146 aaKnown RBP11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 PMP22Q01453 160 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 PMS2P11Q13670 270 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 ALKBH2Q6NS38 261 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 DRAM1Q8N682 238 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 MPC1Q9Y5U8 109 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 KRASP01116 189 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 GCGP01275 180 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 WNT2P09544 360 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 NUBP1P53384 320 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 FFAR4Q5NUL3 377 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 SPINK14Q6IE38 97 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 TMEM170AQ8WVE7 144 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 POM121L2Q96KW2 1035 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 C2orf88Q9BSF0 95 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 STRADBQ9C0K7 418 aa11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 DIDO1Q9BTC0 2240 aaKnown RBP11.81□□□□□ -0.52
VPS9D1-202ENST00000561976 NPIPB11E5RHQ5 1161 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 SYNGR4O95473 234 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 ARR3P36575 388 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 SPATA46Q5T0L3 261 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 TMEM14EPQ6UXP3 125 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 MOB1BQ7L9L4 216 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 CLN8Q9UBY8 286 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 ARHGAP21Q5T5U3 1957 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 IGKV3D-15A0A087WSY6 115 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 PAGE4O60829 102 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 PAX1P15863 534 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 HOXA6P31267 233 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 Q6P435 159 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 TMEM18Q96B42 140 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 NDUFAF3Q9BU61 184 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 MANBALQ9NQG1 85 aa11.8□□□□□ -0.52
VPS9D1-202ENST00000561976 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 OR2H2O95918 312 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 MBP02144 154 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 G6PCP35575 357 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 ZNF816Q0VGE8 651 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 ZNF709Q8N972 641 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 APH1AQ96BI3 265 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 TMEM147Q9BVK8 224 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 IGHV3-64DA0A0J9YX35 117 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 CELA3AP09093 270 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 COX5AP20674 150 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 CHRNA7P36544 502 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 MSMO1Q15800 293 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 DDA1Q9BW61 102 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 PKIBQ9C010 78 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 MRPS18CQ9Y3D5 142 aaKnown RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 TNRC6AQ8NDV7 1962 aaKnown RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 J3QT63 122 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms