RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 KLHL13Q9P2N7 655 aa6.2□□□□□ -1.42
CDH1-203ENST00000561751 THAP10Q9P2Z0 257 aaPredicted RBP6.2□□□□□ -1.42
CDH1-203ENST00000561751 CD207Q9UJ71 328 aa6.2□□□□□ -1.42
CDH1-203ENST00000561751 RNF24Q9Y225 148 aa6.2□□□□□ -1.42
CDH1-203ENST00000561751 HEBP2Q9Y5Z4 205 aa6.2□□□□□ -1.42
CDH1-203ENST00000561751 PTPRSQ13332 1948 aa6.2□□□□□ -1.42
CDH1-203ENST00000561751 A0A1W2PS18 150 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 NPIPA5E9PKD4 350 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 NPIPA3F8WFD2 350 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 H3BRM9 83 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 PHF1O43189 567 aaPredicted RBP6.19□□□□□ -1.42
CDH1-203ENST00000561751 TNFSF14O43557 240 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 CHST1O43916 411 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 SLC16A7O60669 478 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 VAMP5O95183 116 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 EFEMP2O95967 443 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 HLA-DQA1P01909 254 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 PPIAL4GP0DN37 164 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 CRYBB3P26998 211 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 CCR2P41597 374 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 LGALS4P56470 323 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 KRTDAPP60985 99 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 PSG9Q00887 426 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 HIST1H1AQ02539 215 aaPredicted RBP6.19□□□□□ -1.42
CDH1-203ENST00000561751 PDGFRLQ15198 375 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 PSMG4Q5JS54 123 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 ZNF776Q68DI1 518 aaPredicted RBP6.19□□□□□ -1.42
CDH1-203ENST00000561751 TMEM211Q6ICI0 200 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 LCN15Q6UWW0 184 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 SELENOHQ8IZQ5 122 aaKnown RBP6.19□□□□□ -1.42
CDH1-203ENST00000561751 ZNF525Q8N782 197 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 OR8B3Q8NGG8 313 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 OR10G9Q8NGN4 311 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 NUS1Q96E22 293 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
CDH1-203ENST00000561751 FER1L6-AS2Q96M78 137 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 OR8B2Q96RD0 313 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 KLHDC3Q9BQ90 382 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 TIMM29Q9BSF4 260 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 ULBP2Q9BZM5 246 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 COMMD5Q9GZQ3 224 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 HES4Q9HCC6 221 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 STARD5Q9NSY2 213 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 CLEC5AQ9NY25 188 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 MMP17Q9ULZ9 603 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 NPIPA1Q9UND3 350 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 HCFC2Q9Y5Z7 792 aa6.19□□□□□ -1.42
CDH1-203ENST00000561751 GVINP1Q7Z2Y8 2422 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 SCN2AQ99250 2005 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 MED19A0JLT2 244 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 A6NDN8 102 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 C9JCJ5 164 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 ADAM20O43506 726 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 SSSCA1O60232 199 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 IGLV3-1P01715 115 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 SRFP11831 508 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 PMCHP20382 165 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 S100GP29377 79 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 OPRM1P35372 400 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 TIMP3P35625 211 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 AMTP48728 403 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 CYB561P49447 251 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 HERV-K104P61576 105 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 MRPS34P82930 218 aaKnown RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 EGR4Q05215 589 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 TMEM267Q0VDI3 215 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 KLF5Q13887 457 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 ZNF324BQ6AW86 544 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 FAM58AQ8N1B3 248 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 MRPL43Q8N983 215 aaKnown RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 VN1R2Q8NFZ6 395 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 OR1B1Q8NGR6 318 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 THAP3Q8WTV1 239 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 TAF15Q92804 592 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDH1-203ENST00000561751 ZNF479Q96JC4 524 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 Q96M66 194 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 VSTM2LQ96N03 204 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 FGF21Q9NSA1 209 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 PLEKHJ1Q9NW61 149 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 ABI3Q9P2A4 366 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 COPS7AQ9UBW8 275 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 UBE2J1Q9Y385 318 aaPredicted RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 PLXND1Q9Y4D7 1925 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 TECTAO75443 2155 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 TRIOO75962 3097 aa6.18□□□□□ -1.42
CDH1-203ENST00000561751 RIF1Q5UIP0 2472 aaKnown RBP6.18□□□□□ -1.42
CDH1-203ENST00000561751 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 PPIAL4EA0A075B759 164 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 PPIAL4CA0A0B4J2A2 164 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 PSMB11A5LHX3 300 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 FAM90A10PA6NDY2 464 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 FAM90A18PA6NE21 464 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 FAM90A16PA6NEW6 464 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 FAM90A20PA6NIJ5 464 aa6.17□□□□□ -1.42
CDH1-203ENST00000561751 FAM90A8PA6NJQ4 464 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms