RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 OR3A3P47888 321 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
USB1-204ENST00000561568 IL18Q14116 193 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 TGIF2LXQ8IUE1 241 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 ODF3L1Q8IXM7 274 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
USB1-204ENST00000561568 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
USB1-204ENST00000561568 GCDHQ92947 438 aaPredicted RBP13.18□□□□□ -0.3
USB1-204ENST00000561568 CHIAQ9BZP6 476 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
USB1-204ENST00000561568 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
USB1-204ENST00000561568 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 GABARAPH6UMI1 98 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 CTDSPLO15194 276 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 CRYBA1P05813 215 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 OR8U9P0C7N5 309 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 RCVRNP35243 200 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 TAS2R46P59540 309 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 DIAPH2-AS1Q14236 149 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 CDK10Q15131 360 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 FAM71F2Q6NXP2 309 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 MOB3BQ86TA1 216 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 OR8U1Q8NH10 309 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 SNAPC3Q92966 411 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 RAB18Q9NP72 206 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
USB1-204ENST00000561568 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 TIMM23O14925 209 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 SLC22A5O76082 557 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 FCER2P06734 321 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 PTBP1P26599 531 aaKnown RBP eCLIP13.16□□□□□ -0.3
USB1-204ENST00000561568 GPR12P47775 334 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 REG1BP48304 166 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 ACTBP60709 375 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 ACTG1P63261 375 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
USB1-204ENST00000561568 HABP2Q14520 560 aaPredicted RBP13.16□□□□□ -0.3
USB1-204ENST00000561568 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 DHRS11Q6UWP2 260 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 FAM131AQ6UXB0 335 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 ZNF833PQ6ZTB9 187 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
USB1-204ENST00000561568 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 GIMAP1Q8WWP7 306 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 ABHD14BQ96IU4 210 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
USB1-204ENST00000561568 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 MTFP1Q9UDX5 166 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
USB1-204ENST00000561568 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 A0A1W2PPI3 338 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 GPR137BO60478 399 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 SAA2P0DJI9 122 aaPredicted RBP13.15□□□□□ -0.3
USB1-204ENST00000561568 NFYAP23511 347 aaPredicted RBP13.15□□□□□ -0.3
USB1-204ENST00000561568 CD1BP29016 333 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 FCGR2CP31995 323 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
USB1-204ENST00000561568 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
USB1-204ENST00000561568 LY6EQ16553 131 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 OVCH2Q7RTZ1 564 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 OR5H2Q8NGV7 314 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.3
USB1-204ENST00000561568 A6NDX4 124 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 TUSC2O75896 110 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 PMP2P02689 132 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 HLA-DMAP28067 261 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 RFX2P48378 723 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 DYRK1AQ13627 763 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 CCDC190Q86UF4 302 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 OR6Q1Q8NGQ2 317 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 OR56B4Q8NH76 319 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 CFHR4Q92496 578 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
USB1-204ENST00000561568 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
USB1-204ENST00000561568 ZNF736B4DX44 427 aaPredicted RBP13.13□□□□□ -0.31
USB1-204ENST00000561568 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
USB1-204ENST00000561568 CD24P25063 80 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 MC5RP33032 325 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 ETV6P41212 452 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 EBI3Q14213 229 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 ACTBL2Q562R1 376 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 CCBE1Q6UXH8 406 aaPredicted RBP13.13□□□□□ -0.31
USB1-204ENST00000561568 C16orf82Q7Z2V1 217 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 OR6F1Q8NGZ6 308 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms