RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 HCKP08631 526 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 DUX4L4P0CJ87 422 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SULT1A3P0DMM9 295 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SULT1A4P0DMN0 295 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 COX5BP10606 129 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 VPREB1P12018 145 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 IGHV1-2P23083 117 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CPT2P23786 658 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OTX1P32242 354 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 PMELP40967 661 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RPS27P42677 84 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 CX3CR1P49238 355 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RBP2P50120 134 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 PPOXP50336 477 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 MTCP1P56278 107 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TMEM33P57088 247 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF121P58317 390 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 TAS2R31P59538 309 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TAS2R46P59540 309 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ERVFC1-1P60608 527 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RAB14P61106 215 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CYCSP99999 105 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 TGFBR3Q03167 851 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 FMODQ06828 376 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 GK2Q14410 553 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 GRK1Q15835 563 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ODF4Q2M2E3 257 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CDNFQ49AH0 187 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RNASE10Q5GAN6 216 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 TCTEX1D4Q5JR98 221 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CARD17Q5XLA6 110 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 STEAP1BQ6NZ63 245 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 LPCAT3Q6P1A2 487 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TMEM53Q6P2H8 277 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CORO6Q6QEF8 472 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SLC16A14Q7RTX9 510 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ANGPTL5Q86XS5 388 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 LYPD6Q86Y78 171 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF584Q8IVC4 421 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 C1orf174Q8IYL3 243 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF100Q8IYN0 542 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF101Q8IZC7 436 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 MUC20Q8N307 709 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 FAM89BQ8N5H3 189 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ARRDC1Q8N5I2 433 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZIC4Q8N9L1 334 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ASCC1Q8N9N2 400 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZSCAN4Q8NAM6 433 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 CHST4Q8NCG5 386 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 DEFB108BQ8NET1 73 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR51D1Q8NGF3 324 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR51A4Q8NGJ6 313 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR5L1Q8NGL2 311 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR10R2Q8NGX6 335 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR10D3Q8NH80 312 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR1F12Q8NHA8 337 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 OR51E1Q8TCB6 317 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CAPSLQ8WWF8 208 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 AQP3Q92482 292 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 UPRTQ96BW1 309 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SLC25A38Q96DW6 304 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RAB3CQ96E17 227 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SEH1LQ96EE3 360 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 GPER1Q99527 375 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 KLHDC3Q9BQ90 382 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF416Q9BWM5 594 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TTTY10Q9BZA0 68 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF436Q9C0F3 470 aaPredicted RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 CHST5Q9GZS9 411 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CHST6Q9GZX3 395 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 C20orf85Q9H1P6 137 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 KCNK15Q9H427 330 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RHOFQ9HBH0 211 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 DYNLRB1Q9NP97 96 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 GPR84Q9NQS5 396 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 CA10Q9NS85 328 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TMEM38BQ9NVV0 291 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SLC2A8Q9NY64 477 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 TAS2R4Q9NYW5 299 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 RCC2Q9P258 522 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 KLK11Q9UBX7 282 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 ZNF222Q9UK12 451 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 SLC7A11Q9UPY5 501 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 MRPS28Q9Y2Q9 187 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 NOP16Q9Y3C1 178 aaKnown RBP2.59□□□□□ -1.99
SPG11-225ENST00000561391 SLC25A15Q9Y619 301 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 V9GYS6 101 aa2.59□□□□□ -1.99
SPG11-225ENST00000561391 DNAH7Q8WXX0 4024 aa2.59□□□□□ -2
SPG11-225ENST00000561391 STARD9Q9P2P6 4700 aa2.59□□□□□ -2
SPG11-225ENST00000561391 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 TRAV6A0A075B6T7 132 aa2.58□□□□□ -2
SPG11-225ENST00000561391 A6NIN4 97 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ZNF716A6NP11 495 aa2.58□□□□□ -2
SPG11-225ENST00000561391 HMSDA8MTL9 139 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TMEM14DPA8MWL7 114 aa2.58□□□□□ -2
SPG11-225ENST00000561391 F5H5K5 113 aa2.58□□□□□ -2
SPG11-225ENST00000561391 M0R135 149 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TNFSF11O14788 317 aa2.58□□□□□ -2
SPG11-225ENST00000561391 FABP7O15540 132 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ADAM20O43506 726 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms