RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 C8orf31Q8N9H6 132 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 OR52I1Q8NGK6 324 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 FBLIM1Q8WUP2 373 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 ALG8Q9BVK2 526 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 TTTY10Q9BZA0 68 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 TINAGL1Q9GZM7 467 aaPredicted RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 NCOR1P1Q9H4R4 102 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 NEK6Q9HC98 313 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 PLCXD1Q9NUJ7 323 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 DIMT1Q9UNQ2 313 aaKnown RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 PKD1P98161 4303 aa7.15□□□□□ -1.27
HERC1-210ENST00000560897 A0A0B4J203 849 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 A0A1B0GTI1 187 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 C16orf90A8MZG2 172 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 IGLL5B9A064 214 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 EREGO14944 169 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 RTL8CO15255 209 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 WBP4O75554 376 aaKnown RBP7.14□□□□□ -1.27
HERC1-210ENST00000560897 TNFAIP8O95379 198 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 HTR1AP08908 422 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 PRKACBP22694 351 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 PDZK1IP1Q13113 114 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 ODF4Q2M2E3 257 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 C19orf54Q5BKX5 351 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 CD200R1LQ6Q8B3 271 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 C11orf45Q8TAV5 145 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 MND1Q9BWT6 205 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 RHOFQ9HBH0 211 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 MRPS18AQ9NVS2 196 aaKnown RBP7.14□□□□□ -1.27
HERC1-210ENST00000560897 PSORS1C1Q9UIG5 152 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 R4GMQ9 66 aa7.14□□□□□ -1.27
HERC1-210ENST00000560897 ZNF785A8K8V0 405 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 UBE2CO00762 179 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 MRPS14O60783 128 aaKnown RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 KDM4BO94953 1096 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 CDK1P06493 297 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 HSMCR30P0CW71 290 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 KCNJ3P48549 501 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 ROM1Q03395 351 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 DYRK1AQ13627 763 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 MED22Q15528 200 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 Q3ZCU0 254 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 TP53I3Q53FA7 332 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 AKIRIN2Q53H80 203 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 SOHLH1Q5JUK2 328 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 Q6P435 159 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 SYS1Q8N2H4 156 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 CCDC54Q8NEL0 328 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 OR52B4Q8NGK2 314 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 OR52M1Q8NGK5 317 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 ARL11Q969Q4 196 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 RFT1Q96AA3 541 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 C4orf36Q96KX1 117 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 FAM103A1Q9BTL3 118 aaKnown RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 FGF20Q9NP95 211 aaPredicted RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 GFOD1Q9NXC2 390 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 BABAM2Q9NXR7 383 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 PEF1Q9UBV8 284 aaKnown RBP7.13□□□□□ -1.27
HERC1-210ENST00000560897 NUBP2Q9Y5Y2 271 aa7.13□□□□□ -1.27
HERC1-210ENST00000560897 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 A0A087WXM4 84 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 IGHV3-43A0A0B4J1X8 118 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 TRAV39A0A0B4J263 110 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 H3BUA1 57 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 M0R2N4 97 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 IGHV3-43DP0DP04 118 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 GZMHP20718 246 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 CCL1P22362 96 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 AADACP22760 399 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 CRHBPP24387 322 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
HERC1-210ENST00000560897 TAS2R43P59537 309 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 CX3CL1P78423 397 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 ANKRD55Q3KP44 614 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 RSBN1Q5VWQ0 802 aaPredicted RBP7.12□□□□□ -1.27
HERC1-210ENST00000560897 Q6ZSR3 168 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 PRSS48Q7RTY5 328 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 STPG3Q8N7X2 389 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 POC5Q8NA72 575 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 LFNGQ8NES3 379 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 PP6455Q8WZ26 134 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 NR1H4Q96RI1 486 aaPredicted RBP7.12□□□□□ -1.27
HERC1-210ENST00000560897 GNG12Q9UBI6 72 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 ADAM30Q9UKF2 790 aa7.12□□□□□ -1.27
HERC1-210ENST00000560897 MAGEB4O15481 346 aaPredicted RBP7.11□□□□□ -1.27
HERC1-210ENST00000560897 LANCL1O43813 399 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 KIR2DS2P43631 304 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 ZNF137PP52743 207 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 WNT4P56705 351 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 GABARAPL2P60520 117 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 RPS16P62249 146 aaKnown RBP7.11□□□□□ -1.27
HERC1-210ENST00000560897 ZNF85Q03923 595 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 DEFB114Q30KQ6 69 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 TMEM244Q5VVB8 128 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms