RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 OR3A1P47881 315 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 HLA-DRB3P79483 266 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 LPCAT3Q6P1A2 487 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 C11orf88Q6PI97 169 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 GLDNQ6ZMI3 551 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-225ENST00000560005 OR5T2Q8NGG2 359 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 OR13C8Q8NGS7 320 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 PLPPR1Q8TBJ4 325 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 SLC23A1Q9UHI7 598 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 VPREB3Q9UKI3 123 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 FAM96BQ9Y3D0 163 aa16.68■□□□□ 0.26
PSEN1-225ENST00000560005 IGKV1D-8A0A087WSZ0 117 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 SDCBPO00560 298 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-225ENST00000560005 ZNF737O75373 536 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 ERP29P30040 261 aaKnown RBP16.67■□□□□ 0.26
PSEN1-225ENST00000560005 CEBPDP49716 269 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-225ENST00000560005 ARF6P62330 175 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 ATXN7L3Q14CW9 347 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-225ENST00000560005 HERPUD1Q15011 391 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 KRBOX4Q5JUW0 171 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 SLC36A1Q7Z2H8 476 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 ZNF2Q9BSG1 426 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-225ENST00000560005 OR51J1Q9H342 316 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 FLVCR2Q9UPI3 526 aa16.67■□□□□ 0.26
PSEN1-225ENST00000560005 IGHV3OR15-7A0A075B7D8 119 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 BTBD17A6NE02 478 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 GZMHP20718 246 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 UCP3P55916 312 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 COL7A1Q02388 2944 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 OXLD1Q5BKU9 147 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 ZNF788Q6ZQV5 615 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 C11orf44Q8N8P7 122 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 ZNF565Q8N9K5 539 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 MED28Q9H204 178 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 GHITMQ9H3K2 345 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 GPR132Q9UNW8 380 aa16.66■□□□□ 0.26
PSEN1-225ENST00000560005 C14orf166Q9Y224 244 aaKnown RBP16.66■□□□□ 0.26
PSEN1-225ENST00000560005 MEIKINA0A087WXM9 373 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 NPIPB11E5RHQ5 1161 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 GPR37O15354 613 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 SIGLEC5O15389 551 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 ADAM20O43506 726 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 CREBL2O60519 120 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-225ENST00000560005 FCGR2CP31995 323 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 HERV-K104P61576 105 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 AESQ08117 197 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 SLC25A42Q86VD7 318 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 TMEM185AQ8NFB2 350 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 OR10J5Q8NHC4 309 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 CABLES2Q9BTV7 478 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 OR6C3Q9NZP0 311 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 ZNRD1Q9P1U0 126 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 KIF25Q9UIL4 384 aa16.65■□□□□ 0.26
PSEN1-225ENST00000560005 A0A0B4J293 547 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 PGAM2P15259 253 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 RRAS2P62070 204 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-225ENST00000560005 HMGN3Q15651 99 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 ZNF660Q6AZW8 331 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-225ENST00000560005 AKAP14Q86UN6 197 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 MARCH1Q8TCQ1 289 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 CYYR1Q96J86 154 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 AURKAIP1Q9NWT8 199 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-225ENST00000560005 DSCAML1Q8TD84 2053 aa16.64■□□□□ 0.25
PSEN1-225ENST00000560005 DNAH9Q9NYC9 4486 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 FAM172BPA6NC97 362 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 FBP1P09467 338 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 SCTP09683 121 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 ZNF728P0DKX0 622 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 RCC1P18754 421 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-225ENST00000560005 ANXA7P20073 488 aaKnown RBP16.63■□□□□ 0.25
PSEN1-225ENST00000560005 CBX3Q13185 183 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 C4orf46Q504U0 113 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 AADACL3Q5VUY0 350 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 VMO1Q7Z5L0 202 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 TMED4Q7Z7H5 227 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 MOB3AQ96BX8 217 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 GALMQ96C23 342 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 ZNF486Q96H40 463 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-225ENST00000560005 COQ2Q96H96 371 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 GAFA1Q96PS6 74 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 TAF9BQ9HBM6 251 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 KAAG1Q9UBP8 84 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 VSIG4Q9Y279 399 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 SIGLEC9Q9Y336 463 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 MAB21L2Q9Y586 359 aa16.63■□□□□ 0.25
PSEN1-225ENST00000560005 TRBV6-7A0A0A0MS04 114 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 ODAMA1E959 279 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 OR5H14A6NHG9 310 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 SPINT2O43291 252 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 SSNA1O43805 119 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 FCN3O75636 299 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 GYPAP02724 150 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 CTSDP07339 412 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-225ENST00000560005 OR4E1P0C645 316 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 P2RX3P56373 397 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 TMEM128Q5BJH2 165 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 ZNF626Q68DY1 528 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 SLC38A6Q8IZM9 456 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 KIRREL1Q96J84 757 aa16.62■□□□□ 0.25
PSEN1-225ENST00000560005 ING3Q9NXR8 418 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms