RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NCR3LG1Q68D85 454 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 LPCAT3Q6P1A2 487 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 ZNF818PQ6ZRF7 136 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
TPM1-221ENST00000559831 SLC38A6Q8IZM9 456 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 CENPSQ8N2Z9 138 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 ZDHHC22Q8N966 263 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 DUSP18Q8NEJ0 188 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 ZFAND1Q8TCF1 268 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 UPRTQ96BW1 309 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 BEX2Q9BXY8 128 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 IFI27L2Q9H2X8 130 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 BEX1Q9HBH7 125 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 ZNF221Q9UK13 617 aa8.51□□□□□ -1.05
TPM1-221ENST00000559831 FLNBO75369 2602 aaKnown RBP8.51□□□□□ -1.05
TPM1-221ENST00000559831 MYO9AB2RTY4 2548 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 SAA2-SAA4A0A096LPE2 208 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 INMT-MINDY4F8WBC2 141 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 RNASEK-C17orf49H0YIS7 233 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 GPR31O00270 319 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 ITGB1BP1O14713 200 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 TNFSF12O43508 249 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 CTSDP07339 412 aaPredicted RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 SAA2P0DJI9 122 aaPredicted RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 AKR1C4P17516 323 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 GATA3P23771 443 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 OXA1LQ15070 435 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 SURF2Q15527 256 aaPredicted RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 HCP5Q6MZN7 132 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 ZNF645Q8N7E2 425 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 MINDY2Q8NBR6 621 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 ADAD2Q8NCV1 583 aaKnown RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 CHPT1Q8WUD6 406 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 TNFRSF14Q92956 283 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 C5orf66Q9H5L9 145 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 UNKLQ9H9P5 680 aaKnown RBP8.5□□□□□ -1.05
TPM1-221ENST00000559831 GPR132Q9UNW8 380 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 CREBBPQ92793 2442 aa8.5□□□□□ -1.05
TPM1-221ENST00000559831 TRAV40A0A0B4J280 105 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 J3QLI3 93 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 M0R1X1 148 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 SLC22A5O76082 557 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 IL3RAP26951 378 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 S100GP29377 79 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 GNRHRP30968 328 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 PIGPP57054 158 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 HLA-DRB5Q30154 266 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 RPL39P5Q59GN2 51 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 C8orf31Q8N9H6 132 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 CCDC71LQ8N9Z2 235 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 OR11H6Q8NGC7 330 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 ZNF596Q8TC21 504 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 FAM216AQ8WUB2 273 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 C5orf30Q96GV9 206 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 GPHA2Q96T91 129 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 S1PR3Q99500 378 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 AGMATQ9BSE5 352 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 RTBDNQ9BSG5 229 aaPredicted RBP8.49□□□□□ -1.05
TPM1-221ENST00000559831 SDHAF2Q9NX18 166 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 PIPOXQ9P0Z9 390 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
TPM1-221ENST00000559831 NOTCH2Q04721 2471 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 CSMD1Q96PZ7 3565 aa8.49□□□□□ -1.05
TPM1-221ENST00000559831 TEX13DA0A0J9YY54 714 aaPredicted RBP8.48□□□□□ -1.05
TPM1-221ENST00000559831 CENPVL3A0A0U1RRI6 287 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 RAB29O14966 203 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 PEX14O75381 377 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 AVPP01185 164 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 IGLV1-47P01700 117 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 IGLV2-14P01704 120 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 VSIG10L2P0DP72 767 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 REG1BP48304 166 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 UBE2E1P51965 193 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 LGALS4P56470 323 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 TAS2R31P59538 309 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 ZNF626Q68DY1 528 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 ODF3L1Q8IXM7 274 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 BVESQ8NE79 360 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 OR4P4Q8NGL7 312 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 CAPSLQ8WWF8 208 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 ZNF486Q96H40 463 aaPredicted RBP8.48□□□□□ -1.05
TPM1-221ENST00000559831 AKR1E2Q96JD6 320 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 SLC2A9Q9NRM0 540 aa8.48□□□□□ -1.05
TPM1-221ENST00000559831 SETXQ7Z333 2677 aaKnown RBP8.48□□□□□ -1.05
TPM1-221ENST00000559831 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 IGHV1-69DA0A0B4J2H0 117 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 BUB1B-PAK6H3BSN5 160 aa8.47□□□□□ -1.05
TPM1-221ENST00000559831 NPFFO15130 113 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms