RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TAAR3PQ9P1P4 343 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 CACNG5Q9UF02 275 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 PPIAL4AQ9Y536 164 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 RBM7Q9Y580 266 aaKnown RBP4.34□□□□□ -1.72
HMG20A-204ENST00000558288 UNC13CQ8NB66 2214 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 KIAA2026Q5HYC2 2103 aa4.34□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV3D-11A0A0A0MRZ8 115 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1D-13A0A0B4J2D9 117 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1-12A0A0C4DH73 117 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 DUXBA0A1W2PPF3 345 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 J3QKU1 62 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 LILRA1O75019 489 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1D-12P01611 117 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IGHV4-34P06331 123 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IGKV1-13P0DP09 117 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 EGR1P18146 543 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IL3RAP26951 378 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 EIF3IQ13347 325 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SHBQ15464 509 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 NMSQ5H8A3 153 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SP5Q6BEB4 398 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SPACA3Q8IXA5 215 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 POC1BQ8TC44 478 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 EXTL1Q92935 676 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 GPR146Q96CH1 333 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 RAB40CQ96S21 281 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 COL4A2P08572 1712 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ITPR1Q14643 2758 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 DOCK11Q5JSL3 2073 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TRAV34A0A0B4J273 112 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 A0A0G2JRQ6 117 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SYNGR2O43760 224 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PAGE4O60829 102 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 CRYAAP02489 173 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 MSX1P28360 303 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SRP14P37108 136 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 UBE2G2P60604 165 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 KRTDAPP60985 99 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ANKRD39Q53RE8 183 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 LHFPL2Q6ZUX7 228 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 BAGE3Q86Y29 109 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 BAGE2Q86Y30 109 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 OR10V1Q8NGI7 309 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PLPPR1Q8TBJ4 325 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 IL1F10Q8WWZ1 152 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 FAM131CQ96AQ9 280 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PINX1Q96BK5 328 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 OR4C12Q96R67 309 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PTRH2Q9Y3E5 179 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SLC22A20A6NK97 555 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 NPIPA2E9PIF3 369 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 NPIPA3F8WFD2 350 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TNFSF13O75888 250 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 CLDN1O95832 211 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PATE4P0C8F1 98 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 PSG2P11465 335 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 UCP1P25874 307 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 CDKN1AP38936 164 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 NPBWR2P48146 333 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 RANP62826 216 aaKnown RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 SERF2P84101 59 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM164Q5U3C3 297 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM211Q6ICI0 200 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 VASH2Q86V25 355 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF525Q8N782 197 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 BTF3L4Q96K17 158 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TXN2Q99757 166 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 TMEM106BQ9NUM4 274 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 RNF115Q9Y4L5 304 aa4.33□□□□□ -1.72
HMG20A-204ENST00000558288 NCOA6Q14686 2063 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-204ENST00000558288 ABCA12Q86UK0 2595 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 PRRC2CQ9Y520 2896 aaKnown RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 TRBV11-1A0A0K0K1C0 115 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 UMODP07911 640 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 IL6RP08887 468 aaPredicted RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 RBM11P57052 281 aaKnown RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 TMPRSS3P57727 454 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 SLC38A11Q08AI6 406 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 MMDQ15546 238 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 PLPPR5Q32ZL2 321 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 PHYHD1Q5SRE7 291 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 GUSBP11Q6P575 273 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 NUFIP2Q7Z417 695 aaKnown RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 OR5D13Q8NGL4 314 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 SGMS2Q8NHU3 365 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 C22orf15Q8WYQ4 148 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 NEIL1Q96FI4 390 aaPredicted RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 SGCZQ96LD1 299 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 IMMP2LQ96T52 175 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 AGMATQ9BSE5 352 aa4.32□□□□□ -1.72
HMG20A-204ENST00000558288 PSMG3Q9BT73 122 aaPredicted RBP4.32□□□□□ -1.72
HMG20A-204ENST00000558288 LRRC61Q9BV99 259 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms